Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.37□□□□□ -0.11
Gjb1P28230 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.37□□□□□ -0.11
Gjb1P28230 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.37□□□□□ -0.11
Gjb1P28230 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gjb1P28230 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gjb1P28230 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gjb1P28230 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gjb1P28230 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Gjb1P28230 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gjb1P28230 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gjb1P28230 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gjb1P28230 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gjb1P28230 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gjb1P28230 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gjb1P28230 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Gjb1P28230 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gjb1P28230 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gjb1P28230 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.37□□□□□ -0.11
Gjb1P28230 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gjb1P28230 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gjb1P28230 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Gjb1P28230 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Gjb1P28230 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 Gm13047-201ENSMUST00000117116 815 ntBASIC14.36□□□□□ -0.11
Gjb1P28230 Gm12795-201ENSMUST00000117594 539 ntBASIC14.36□□□□□ -0.11
Gjb1P28230 Gm14704-201ENSMUST00000120300 874 ntBASIC14.36□□□□□ -0.11
Gjb1P28230 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.36□□□□□ -0.11
Gjb1P28230 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.36□□□□□ -0.11
Gjb1P28230 Gm25951-201ENSMUST00000175330 64 ntBASIC14.36□□□□□ -0.11
Gjb1P28230 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.36□□□□□ -0.11
Gjb1P28230 Gm8365-201ENSMUST00000197334 648 ntBASIC14.36□□□□□ -0.11
Gjb1P28230 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Gjb1P28230 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gjb1P28230 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.36□□□□□ -0.11
Gjb1P28230 AC099645.1-201ENSMUST00000226476 1105 ntBASIC14.36□□□□□ -0.11
Gjb1P28230 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gjb1P28230 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gjb1P28230 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gjb1P28230 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gjb1P28230 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.36□□□□□ -0.11
Gjb1P28230 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Gjb1P28230 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gjb1P28230 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.35□□□□□ -0.11
Gjb1P28230 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gjb1P28230 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gjb1P28230 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gjb1P28230 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Gjb1P28230 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gjb1P28230 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gjb1P28230 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gjb1P28230 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gjb1P28230 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gjb1P28230 Gm11340-201ENSMUST00000119226 412 ntBASIC14.35□□□□□ -0.11
Gjb1P28230 Gm14460-201ENSMUST00000121511 639 ntBASIC14.35□□□□□ -0.11
Gjb1P28230 Gm6963-201ENSMUST00000147879 379 ntBASIC14.35□□□□□ -0.11
Gjb1P28230 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gjb1P28230 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC14.35□□□□□ -0.11
Gjb1P28230 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.35□□□□□ -0.11
Gjb1P28230 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gjb1P28230 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gjb1P28230 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.35□□□□□ -0.11
Gjb1P28230 Gm29615-201ENSMUST00000185371 697 ntBASIC14.35□□□□□ -0.11
Gjb1P28230 Gm28224-201ENSMUST00000186078 697 ntBASIC14.35□□□□□ -0.11
Gjb1P28230 Gm29001-201ENSMUST00000186177 697 ntBASIC14.35□□□□□ -0.11
Gjb1P28230 Gm28292-201ENSMUST00000186593 697 ntBASIC14.35□□□□□ -0.11
Gjb1P28230 Gm28101-201ENSMUST00000187608 697 ntBASIC14.35□□□□□ -0.11
Gjb1P28230 Gm29076-201ENSMUST00000187689 697 ntBASIC14.35□□□□□ -0.11
Gjb1P28230 Gm28302-201ENSMUST00000187931 697 ntBASIC14.35□□□□□ -0.11
Gjb1P28230 Gm28646-201ENSMUST00000188220 697 ntBASIC14.35□□□□□ -0.11
Gjb1P28230 Gm28205-201ENSMUST00000189177 697 ntBASIC14.35□□□□□ -0.11
Gjb1P28230 Gm29032-201ENSMUST00000189797 697 ntBASIC14.35□□□□□ -0.11
Gjb1P28230 Gm28695-201ENSMUST00000190300 697 ntBASIC14.35□□□□□ -0.11
Gjb1P28230 Gm37448-201ENSMUST00000192795 697 ntBASIC14.35□□□□□ -0.11
Gjb1P28230 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.35□□□□□ -0.11
Gjb1P28230 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gjb1P28230 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Gjb1P28230 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC14.35□□□□□ -0.11
Gjb1P28230 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gjb1P28230 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms