Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Hmga1P17095 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hmga1P17095 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmga1P17095 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Hmga1P17095 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hmga1P17095 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmga1P17095 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmga1P17095 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmga1P17095 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.15□□□□□ -0.3
Hmga1P17095 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.15□□□□□ -0.3
Hmga1P17095 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.15□□□□□ -0.3
Hmga1P17095 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmga1P17095 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmga1P17095 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hmga1P17095 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.15□□□□□ -0.3
Hmga1P17095 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmga1P17095 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmga1P17095 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hmga1P17095 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmga1P17095 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmga1P17095 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Hmga1P17095 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmga1P17095 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmga1P17095 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmga1P17095 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmga1P17095 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmga1P17095 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmga1P17095 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.15□□□□□ -0.3
Hmga1P17095 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.15□□□□□ -0.3
Hmga1P17095 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmga1P17095 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmga1P17095 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Hmga1P17095 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmga1P17095 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmga1P17095 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Hmga1P17095 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmga1P17095 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmga1P17095 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmga1P17095 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.15□□□□□ -0.3
Hmga1P17095 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hmga1P17095 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Hmga1P17095 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hmga1P17095 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hmga1P17095 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.14□□□□□ -0.31
Hmga1P17095 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hmga1P17095 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Hmga1P17095 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hmga1P17095 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.14□□□□□ -0.31
Hmga1P17095 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Hmga1P17095 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.14□□□□□ -0.31
Hmga1P17095 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Hmga1P17095 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.14□□□□□ -0.31
Hmga1P17095 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.14□□□□□ -0.31
Hmga1P17095 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Hmga1P17095 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.14□□□□□ -0.31
Hmga1P17095 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hmga1P17095 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmga1P17095 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hmga1P17095 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmga1P17095 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hmga1P17095 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmga1P17095 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.13□□□□□ -0.31
Hmga1P17095 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmga1P17095 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Hmga1P17095 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Hmga1P17095 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmga1P17095 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hmga1P17095 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmga1P17095 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hmga1P17095 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmga1P17095 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmga1P17095 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.13□□□□□ -0.31
Hmga1P17095 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.13□□□□□ -0.31
Hmga1P17095 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmga1P17095 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Hmga1P17095 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms