Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccl1P10146 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccl1P10146 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Ccl1P10146 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccl1P10146 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccl1P10146 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccl1P10146 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccl1P10146 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccl1P10146 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccl1P10146 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccl1P10146 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ccl1P10146 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ccl1P10146 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Ccl1P10146 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccl1P10146 Gm2238-201ENSMUST00000192074 3669 ntBASIC10□□□□□ -0.81
Ccl1P10146 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccl1P10146 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC9.99□□□□□ -0.81
Ccl1P10146 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC9.99□□□□□ -0.81
Ccl1P10146 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Ccl1P10146 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Ccl1P10146 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Ccl1P10146 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Gm44806-201ENSMUST00000205574 2303 ntBASIC9.99□□□□□ -0.81
Ccl1P10146 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC9.99□□□□□ -0.81
Ccl1P10146 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Gm44942-201ENSMUST00000096093 2072 ntBASIC9.99□□□□□ -0.81
Ccl1P10146 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC9.99□□□□□ -0.81
Ccl1P10146 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC9.99□□□□□ -0.81
Ccl1P10146 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Ccl1P10146 Rprl2-201ENSMUST00000157150 290 ntBASIC9.99□□□□□ -0.81
Ccl1P10146 Gm18766-201ENSMUST00000189811 808 ntBASIC9.99□□□□□ -0.81
Ccl1P10146 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC9.99□□□□□ -0.81
Ccl1P10146 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Ccl1P10146 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC9.99□□□□□ -0.81
Ccl1P10146 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC9.99□□□□□ -0.81
Ccl1P10146 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Ccl1P10146 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC9.99□□□□□ -0.81
Ccl1P10146 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Ccl1P10146 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Ccl1P10146 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl1P10146 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl1P10146 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Ccl1P10146 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl1P10146 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Ccl1P10146 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl1P10146 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl1P10146 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl1P10146 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl1P10146 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl1P10146 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl1P10146 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl1P10146 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Ccl1P10146 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl1P10146 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl1P10146 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Ccl1P10146 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Ccl1P10146 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl1P10146 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Ccl1P10146 Gm6161-201ENSMUST00000121942 1102 ntBASIC9.98□□□□□ -0.81
Ccl1P10146 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl1P10146 Gm9727-201ENSMUST00000161387 555 ntBASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms