Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Gm25109-201ENSMUST00000122474 114 ntBASIC10.9□□□□□ -0.66
Ly6c1P0CW02 Gm26185-201ENSMUST00000157692 266 ntBASIC10.9□□□□□ -0.66
Ly6c1P0CW02 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ly6c1P0CW02 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.9□□□□□ -0.66
Ly6c1P0CW02 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ly6c1P0CW02 AY702102-202ENSMUST00000194651 1173 ntBASIC10.9□□□□□ -0.66
Ly6c1P0CW02 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC10.9□□□□□ -0.66
Ly6c1P0CW02 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.9□□□□□ -0.66
Ly6c1P0CW02 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC10.9□□□□□ -0.66
Ly6c1P0CW02 AC139323.1-201ENSMUST00000223370 1040 ntBASIC10.9□□□□□ -0.66
Ly6c1P0CW02 AC162940.1-201ENSMUST00000224745 1167 ntBASIC10.9□□□□□ -0.66
Ly6c1P0CW02 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.9□□□□□ -0.66
Ly6c1P0CW02 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ly6c1P0CW02 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.9□□□□□ -0.66
Ly6c1P0CW02 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.9□□□□□ -0.66
Ly6c1P0CW02 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ly6c1P0CW02 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ly6c1P0CW02 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Ly6c1P0CW02 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ly6c1P0CW02 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Ly6c1P0CW02 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ly6c1P0CW02 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ly6c1P0CW02 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ly6c1P0CW02 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ly6c1P0CW02 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ly6c1P0CW02 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ly6c1P0CW02 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Ly6c1P0CW02 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Ly6c1P0CW02 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ly6c1P0CW02 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.9□□□□□ -0.67
Ly6c1P0CW02 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Ly6c1P0CW02 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC10.9□□□□□ -0.67
Ly6c1P0CW02 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.67
Ly6c1P0CW02 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ly6c1P0CW02 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ly6c1P0CW02 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Gm8581-201ENSMUST00000188636 890 ntBASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Gm42516-201ENSMUST00000198691 767 ntBASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Gm34272-201ENSMUST00000208886 253 ntBASIC10.89□□□□□ -0.67
Ly6c1P0CW02 CT010480.1-201ENSMUST00000223612 363 ntBASIC10.89□□□□□ -0.67
Ly6c1P0CW02 CT025552.1-201ENSMUST00000224561 521 ntBASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Hprt-201ENSMUST00000026723 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ly6c1P0CW02 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ly6c1P0CW02 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ly6c1P0CW02 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ly6c1P0CW02 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ly6c1P0CW02 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ly6c1P0CW02 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ly6c1P0CW02 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ly6c1P0CW02 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ly6c1P0CW02 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ly6c1P0CW02 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ly6c1P0CW02 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ly6c1P0CW02 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ly6c1P0CW02 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.88□□□□□ -0.67
Ly6c1P0CW02 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ly6c1P0CW02 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ly6c1P0CW02 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms