Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc9P09633 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc9P09633 Gm42937-201ENSMUST00000197360 752 ntBASIC16.64■□□□□ 0.25
Hoxc9P09633 Gm42997-202ENSMUST00000200321 985 ntBASIC16.64■□□□□ 0.25
Hoxc9P09633 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc9P09633 Gm45598-202ENSMUST00000210719 986 ntBASIC16.64■□□□□ 0.25
Hoxc9P09633 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC16.64■□□□□ 0.25
Hoxc9P09633 AC138604.1-201ENSMUST00000226969 739 ntBASIC16.64■□□□□ 0.25
Hoxc9P09633 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc9P09633 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc9P09633 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc9P09633 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Hoxc9P09633 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc9P09633 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc9P09633 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc9P09633 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc9P09633 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc9P09633 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc9P09633 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
Hoxc9P09633 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc9P09633 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc9P09633 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc9P09633 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc9P09633 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc9P09633 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC16.64■□□□□ 0.25
Hoxc9P09633 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc9P09633 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc9P09633 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc9P09633 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc9P09633 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc9P09633 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc9P09633 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc9P09633 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc9P09633 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.63■□□□□ 0.25
Hoxc9P09633 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc9P09633 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc9P09633 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Hoxc9P09633 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC16.63■□□□□ 0.25
Hoxc9P09633 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC16.63■□□□□ 0.25
Hoxc9P09633 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC16.63■□□□□ 0.25
Hoxc9P09633 Gm17812-201ENSMUST00000204935 318 ntBASIC16.63■□□□□ 0.25
Hoxc9P09633 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc9P09633 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Hoxc9P09633 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc9P09633 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Hoxc9P09633 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc9P09633 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc9P09633 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC16.63■□□□□ 0.25
Hoxc9P09633 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc9P09633 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc9P09633 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc9P09633 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC16.62■□□□□ 0.25
Hoxc9P09633 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc9P09633 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc9P09633 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc9P09633 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc9P09633 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc9P09633 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc9P09633 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Hoxc9P09633 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc9P09633 Gm14644-201ENSMUST00000116671 647 ntBASIC16.62■□□□□ 0.25
Hoxc9P09633 Gm14263-201ENSMUST00000117955 746 ntBASIC16.62■□□□□ 0.25
Hoxc9P09633 Gm11331-201ENSMUST00000119764 288 ntBASIC16.62■□□□□ 0.25
Hoxc9P09633 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc9P09633 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC16.62■□□□□ 0.25
Hoxc9P09633 Gm19187-201ENSMUST00000206781 892 ntBASIC16.62■□□□□ 0.25
Hoxc9P09633 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC16.62■□□□□ 0.25
Hoxc9P09633 AC153974.2-201ENSMUST00000218577 1025 ntBASIC16.62■□□□□ 0.25
Hoxc9P09633 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc9P09633 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC16.62■□□□□ 0.25
Hoxc9P09633 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC16.62■□□□□ 0.25
Hoxc9P09633 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc9P09633 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc9P09633 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc9P09633 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc9P09633 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc9P09633 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc9P09633 Gm9924-202ENSMUST00000192760 2311 ntBASIC16.62■□□□□ 0.25
Hoxc9P09633 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc9P09633 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc9P09633 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.61■□□□□ 0.25
Hoxc9P09633 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc9P09633 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Hoxc9P09633 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc9P09633 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Hoxc9P09633 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc9P09633 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC16.61■□□□□ 0.25
Hoxc9P09633 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC16.61■□□□□ 0.25
Hoxc9P09633 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC16.61■□□□□ 0.25
Hoxc9P09633 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc9P09633 Gm20426-201ENSMUST00000173657 440 ntBASIC16.61■□□□□ 0.25
Hoxc9P09633 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Hoxc9P09633 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc9P09633 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc9P09633 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc9P09633 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc9P09633 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc9P09633 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc9P09633 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc9P09633 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms