Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TnfP06804 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TnfP06804 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TnfP06804 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TnfP06804 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TnfP06804 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TnfP06804 Gm24255-201ENSMUST00000104481 128 ntBASIC13.7□□□□□ -0.22
TnfP06804 Gm14921-201ENSMUST00000118643 908 ntBASIC13.7□□□□□ -0.22
TnfP06804 Gm13492-201ENSMUST00000119772 665 ntBASIC13.7□□□□□ -0.22
TnfP06804 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TnfP06804 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TnfP06804 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.7□□□□□ -0.22
TnfP06804 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.7□□□□□ -0.22
TnfP06804 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TnfP06804 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TnfP06804 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TnfP06804 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.7□□□□□ -0.22
TnfP06804 Daam2-202ENSMUST00000224595 1926 ntBASIC13.7□□□□□ -0.22
TnfP06804 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TnfP06804 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
TnfP06804 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TnfP06804 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TnfP06804 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.69□□□□□ -0.22
TnfP06804 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TnfP06804 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.69□□□□□ -0.22
TnfP06804 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TnfP06804 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TnfP06804 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TnfP06804 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
TnfP06804 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.69□□□□□ -0.22
TnfP06804 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TnfP06804 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.69□□□□□ -0.22
TnfP06804 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TnfP06804 Gm22058-201ENSMUST00000083393 310 ntBASIC13.69□□□□□ -0.22
TnfP06804 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TnfP06804 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.69□□□□□ -0.22
TnfP06804 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.69□□□□□ -0.22
TnfP06804 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.69□□□□□ -0.22
TnfP06804 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.69□□□□□ -0.22
TnfP06804 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TnfP06804 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.69□□□□□ -0.22
TnfP06804 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TnfP06804 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.68□□□□□ -0.22
TnfP06804 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
TnfP06804 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.68□□□□□ -0.22
TnfP06804 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.68□□□□□ -0.22
TnfP06804 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Gm11964-201ENSMUST00000120982 444 ntBASIC13.68□□□□□ -0.22
TnfP06804 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TnfP06804 Gm27243-201ENSMUST00000183964 521 ntBASIC13.68□□□□□ -0.22
TnfP06804 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.68□□□□□ -0.22
TnfP06804 Gm21769-201ENSMUST00000211922 111 ntBASIC13.68□□□□□ -0.22
TnfP06804 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Grk6-205ENSMUST00000224653 2976 ntBASIC13.68□□□□□ -0.22
TnfP06804 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.68□□□□□ -0.22
TnfP06804 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TnfP06804 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TnfP06804 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms