Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H3f3cP02301 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H3f3cP02301 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H3f3cP02301 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H3f3cP02301 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H3f3cP02301 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
H3f3cP02301 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
H3f3cP02301 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H3f3cP02301 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H3f3cP02301 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.11□□□□□ -0.63
H3f3cP02301 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.11□□□□□ -0.63
H3f3cP02301 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
H3f3cP02301 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
H3f3cP02301 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.11□□□□□ -0.63
H3f3cP02301 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.11□□□□□ -0.63
H3f3cP02301 Gm11618-201ENSMUST00000117946 267 ntBASIC11.11□□□□□ -0.63
H3f3cP02301 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.11□□□□□ -0.63
H3f3cP02301 Gm17150-201ENSMUST00000165577 381 ntBASIC11.11□□□□□ -0.63
H3f3cP02301 Gm8810-201ENSMUST00000172895 754 ntBASIC11.11□□□□□ -0.63
H3f3cP02301 Gm27847-201ENSMUST00000183711 107 ntBASIC11.11□□□□□ -0.63
H3f3cP02301 Gm27375-201ENSMUST00000183799 107 ntBASIC11.11□□□□□ -0.63
H3f3cP02301 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.11□□□□□ -0.63
H3f3cP02301 Gm19931-201ENSMUST00000198920 368 ntBASIC11.11□□□□□ -0.63
H3f3cP02301 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.11□□□□□ -0.63
H3f3cP02301 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
H3f3cP02301 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.11□□□□□ -0.63
H3f3cP02301 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.11□□□□□ -0.63
H3f3cP02301 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.11□□□□□ -0.63
H3f3cP02301 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
H3f3cP02301 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.11□□□□□ -0.63
H3f3cP02301 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
H3f3cP02301 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.11□□□□□ -0.63
H3f3cP02301 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3cP02301 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.1□□□□□ -0.63
H3f3cP02301 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
H3f3cP02301 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.1□□□□□ -0.63
H3f3cP02301 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.1□□□□□ -0.63
H3f3cP02301 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.1□□□□□ -0.63
H3f3cP02301 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
H3f3cP02301 Gm27839-201ENSMUST00000184242 106 ntBASIC11.1□□□□□ -0.63
H3f3cP02301 Gm37922-201ENSMUST00000195596 455 ntBASIC11.1□□□□□ -0.63
H3f3cP02301 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.1□□□□□ -0.63
H3f3cP02301 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.1□□□□□ -0.63
H3f3cP02301 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
H3f3cP02301 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
H3f3cP02301 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
H3f3cP02301 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.1□□□□□ -0.63
H3f3cP02301 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
H3f3cP02301 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.1□□□□□ -0.63
H3f3cP02301 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
H3f3cP02301 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.1□□□□□ -0.63
H3f3cP02301 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3cP02301 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
H3f3cP02301 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms