Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CopeO89079 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CopeO89079 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopeO89079 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopeO89079 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopeO89079 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopeO89079 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.33□□□□□ -0.28
CopeO89079 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CopeO89079 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CopeO89079 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.33□□□□□ -0.28
CopeO89079 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CopeO89079 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CopeO89079 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopeO89079 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.33□□□□□ -0.28
CopeO89079 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.33□□□□□ -0.28
CopeO89079 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CopeO89079 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CopeO89079 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.33□□□□□ -0.28
CopeO89079 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
CopeO89079 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.33□□□□□ -0.28
CopeO89079 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopeO89079 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopeO89079 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.33□□□□□ -0.28
CopeO89079 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopeO89079 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopeO89079 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopeO89079 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopeO89079 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopeO89079 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopeO89079 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CopeO89079 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.33□□□□□ -0.28
CopeO89079 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.33□□□□□ -0.28
CopeO89079 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CopeO89079 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.32□□□□□ -0.28
CopeO89079 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CopeO89079 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
CopeO89079 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CopeO89079 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopeO89079 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopeO89079 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopeO89079 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.32□□□□□ -0.28
CopeO89079 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CopeO89079 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.32□□□□□ -0.28
CopeO89079 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopeO89079 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CopeO89079 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopeO89079 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.32□□□□□ -0.28
CopeO89079 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopeO89079 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.32□□□□□ -0.28
CopeO89079 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.32□□□□□ -0.28
CopeO89079 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopeO89079 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.32□□□□□ -0.28
CopeO89079 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.32□□□□□ -0.28
CopeO89079 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopeO89079 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.32□□□□□ -0.28
CopeO89079 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.32□□□□□ -0.28
CopeO89079 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.32□□□□□ -0.28
CopeO89079 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CopeO89079 Gm27306-201ENSMUST00000183970 107 ntBASIC13.32□□□□□ -0.28
CopeO89079 Gm38223-201ENSMUST00000194484 695 ntBASIC13.32□□□□□ -0.28
CopeO89079 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopeO89079 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CopeO89079 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopeO89079 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.32□□□□□ -0.28
CopeO89079 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopeO89079 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopeO89079 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
CopeO89079 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.32□□□□□ -0.28
CopeO89079 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopeO89079 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CopeO89079 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopeO89079 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopeO89079 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopeO89079 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.32□□□□□ -0.28
CopeO89079 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopeO89079 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopeO89079 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CopeO89079 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopeO89079 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopeO89079 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopeO89079 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CopeO89079 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopeO89079 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopeO89079 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CopeO89079 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CopeO89079 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CopeO89079 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CopeO89079 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CopeO89079 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.31□□□□□ -0.28
CopeO89079 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.31□□□□□ -0.28
CopeO89079 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.31□□□□□ -0.28
CopeO89079 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.31□□□□□ -0.28
CopeO89079 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.31□□□□□ -0.28
CopeO89079 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CopeO89079 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopeO89079 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopeO89079 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CopeO89079 Gm29667-201ENSMUST00000190817 490 ntBASIC13.31□□□□□ -0.28
CopeO89079 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopeO89079 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms