Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syn1O88935 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Syn1O88935 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Syn1O88935 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Syn1O88935 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Syn1O88935 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.3□□□□□ -0.28
Syn1O88935 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.3□□□□□ -0.28
Syn1O88935 Gm8365-201ENSMUST00000197334 648 ntBASIC13.3□□□□□ -0.28
Syn1O88935 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.3□□□□□ -0.28
Syn1O88935 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.3□□□□□ -0.28
Syn1O88935 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.3□□□□□ -0.28
Syn1O88935 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Syn1O88935 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Syn1O88935 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syn1O88935 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syn1O88935 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.3□□□□□ -0.28
Syn1O88935 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syn1O88935 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syn1O88935 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Syn1O88935 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.29□□□□□ -0.28
Syn1O88935 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.29□□□□□ -0.28
Syn1O88935 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Syn1O88935 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.29□□□□□ -0.28
Syn1O88935 Gm10051-201ENSMUST00000145209 414 ntBASIC13.29□□□□□ -0.28
Syn1O88935 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.29□□□□□ -0.28
Syn1O88935 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.29□□□□□ -0.28
Syn1O88935 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.29□□□□□ -0.28
Syn1O88935 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.29□□□□□ -0.28
Syn1O88935 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.29□□□□□ -0.28
Syn1O88935 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.29□□□□□ -0.28
Syn1O88935 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Syn1O88935 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.29□□□□□ -0.28
Syn1O88935 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Syn1O88935 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Syn1O88935 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.29□□□□□ -0.28
Syn1O88935 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.29□□□□□ -0.28
Syn1O88935 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.29□□□□□ -0.28
Syn1O88935 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syn1O88935 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syn1O88935 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syn1O88935 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Syn1O88935 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syn1O88935 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syn1O88935 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.28□□□□□ -0.28
Syn1O88935 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syn1O88935 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syn1O88935 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.28□□□□□ -0.28
Syn1O88935 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Syn1O88935 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syn1O88935 Gm17812-201ENSMUST00000204935 318 ntBASIC13.28□□□□□ -0.28
Syn1O88935 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.28□□□□□ -0.28
Syn1O88935 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.28□□□□□ -0.28
Syn1O88935 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.28□□□□□ -0.28
Syn1O88935 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syn1O88935 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.28□□□□□ -0.28
Syn1O88935 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syn1O88935 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syn1O88935 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syn1O88935 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syn1O88935 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syn1O88935 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Syn1O88935 Gm10312-201ENSMUST00000078515 489 ntBASIC13.28□□□□□ -0.28
Syn1O88935 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC13.28□□□□□ -0.28
Syn1O88935 Gm22058-201ENSMUST00000083393 310 ntBASIC13.28□□□□□ -0.28
Syn1O88935 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syn1O88935 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syn1O88935 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syn1O88935 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syn1O88935 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syn1O88935 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Syn1O88935 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Syn1O88935 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syn1O88935 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syn1O88935 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Syn1O88935 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syn1O88935 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Syn1O88935 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syn1O88935 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms