Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hcn1O88704 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Hcn1O88704 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hcn1O88704 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hcn1O88704 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hcn1O88704 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hcn1O88704 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Hcn1O88704 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.39□□□□□ -0.43
Hcn1O88704 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Hcn1O88704 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.39□□□□□ -0.43
Hcn1O88704 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.39□□□□□ -0.43
Hcn1O88704 Gm8602-201ENSMUST00000184045 607 ntBASIC12.39□□□□□ -0.43
Hcn1O88704 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.39□□□□□ -0.43
Hcn1O88704 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.39□□□□□ -0.43
Hcn1O88704 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Hcn1O88704 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Hcn1O88704 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Hcn1O88704 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.39□□□□□ -0.43
Hcn1O88704 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcn1O88704 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Hcn1O88704 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Hcn1O88704 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.38□□□□□ -0.43
Hcn1O88704 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.38□□□□□ -0.43
Hcn1O88704 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.38□□□□□ -0.43
Hcn1O88704 Gm18187-201ENSMUST00000196476 984 ntBASIC12.38□□□□□ -0.43
Hcn1O88704 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.38□□□□□ -0.43
Hcn1O88704 Gm18473-201ENSMUST00000220543 868 ntBASIC12.38□□□□□ -0.43
Hcn1O88704 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Hcn1O88704 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.38□□□□□ -0.43
Hcn1O88704 Gm26315-201ENSMUST00000083890 321 ntBASIC12.38□□□□□ -0.43
Hcn1O88704 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.38□□□□□ -0.43
Hcn1O88704 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.38□□□□□ -0.43
Hcn1O88704 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.38□□□□□ -0.43
Hcn1O88704 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Hcn1O88704 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.38□□□□□ -0.43
Hcn1O88704 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.38□□□□□ -0.43
Hcn1O88704 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Hcn1O88704 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcn1O88704 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.37□□□□□ -0.43
Hcn1O88704 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hcn1O88704 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms