Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Gm10766-202ENSMUST00000194123 606 ntBASIC12.05□□□□□ -0.48
Hps1O08983 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.05□□□□□ -0.48
Hps1O08983 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.05□□□□□ -0.48
Hps1O08983 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.05□□□□□ -0.48
Hps1O08983 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Hps1O08983 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.05□□□□□ -0.48
Hps1O08983 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Hps1O08983 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hps1O08983 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hps1O08983 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Hps1O08983 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Hps1O08983 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hps1O08983 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hps1O08983 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hps1O08983 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hps1O08983 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hps1O08983 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hps1O08983 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hps1O08983 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hps1O08983 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Hps1O08983 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hps1O08983 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Hps1O08983 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Hps1O08983 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Hps1O08983 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.05□□□□□ -0.48
Hps1O08983 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Hps1O08983 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Hps1O08983 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.05□□□□□ -0.48
Hps1O08983 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hps1O08983 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hps1O08983 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Hps1O08983 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hps1O08983 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.04□□□□□ -0.48
Hps1O08983 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.04□□□□□ -0.48
Hps1O08983 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hps1O08983 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hps1O08983 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hps1O08983 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hps1O08983 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hps1O08983 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Hps1O08983 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.04□□□□□ -0.48
Hps1O08983 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.04□□□□□ -0.48
Hps1O08983 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Hps1O08983 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.04□□□□□ -0.48
Hps1O08983 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hps1O08983 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.04□□□□□ -0.48
Hps1O08983 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.04□□□□□ -0.48
Hps1O08983 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.04□□□□□ -0.48
Hps1O08983 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hps1O08983 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.04□□□□□ -0.48
Hps1O08983 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.04□□□□□ -0.48
Hps1O08983 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hps1O08983 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hps1O08983 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.04□□□□□ -0.48
Hps1O08983 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hps1O08983 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Hps1O08983 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.03□□□□□ -0.48
Hps1O08983 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms