Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.3□□□□□ -0.28
Trove2O08848 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trove2O08848 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trove2O08848 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trove2O08848 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trove2O08848 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.3□□□□□ -0.28
Trove2O08848 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trove2O08848 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trove2O08848 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trove2O08848 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trove2O08848 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trove2O08848 Gm12151-201ENSMUST00000121374 290 ntBASIC13.3□□□□□ -0.28
Trove2O08848 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trove2O08848 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trove2O08848 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trove2O08848 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trove2O08848 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.3□□□□□ -0.28
Trove2O08848 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trove2O08848 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trove2O08848 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trove2O08848 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trove2O08848 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trove2O08848 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Trove2O08848 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trove2O08848 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trove2O08848 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trove2O08848 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trove2O08848 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trove2O08848 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Trove2O08848 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.29□□□□□ -0.28
Trove2O08848 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trove2O08848 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.29□□□□□ -0.28
Trove2O08848 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.29□□□□□ -0.28
Trove2O08848 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 Gm18905-201ENSMUST00000205454 928 ntBASIC13.29□□□□□ -0.28
Trove2O08848 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.29□□□□□ -0.28
Trove2O08848 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.29□□□□□ -0.28
Trove2O08848 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.29□□□□□ -0.28
Trove2O08848 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.29□□□□□ -0.28
Trove2O08848 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trove2O08848 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.29□□□□□ -0.28
Trove2O08848 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trove2O08848 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trove2O08848 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trove2O08848 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trove2O08848 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.29□□□□□ -0.28
Trove2O08848 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trove2O08848 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Trove2O08848 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trove2O08848 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trove2O08848 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trove2O08848 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trove2O08848 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trove2O08848 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trove2O08848 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trove2O08848 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trove2O08848 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trove2O08848 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trove2O08848 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.28□□□□□ -0.28
Trove2O08848 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trove2O08848 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trove2O08848 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trove2O08848 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trove2O08848 Gm27838-201ENSMUST00000184829 128 ntBASIC13.28□□□□□ -0.28
Trove2O08848 Mir7023-201ENSMUST00000185093 64 ntBASIC13.28□□□□□ -0.28
Trove2O08848 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.28□□□□□ -0.28
Trove2O08848 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.28□□□□□ -0.28
Trove2O08848 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trove2O08848 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trove2O08848 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trove2O08848 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.28□□□□□ -0.28
Trove2O08848 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.28□□□□□ -0.28
Trove2O08848 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trove2O08848 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trove2O08848 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trove2O08848 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.28□□□□□ -0.28
Trove2O08848 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trove2O08848 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trove2O08848 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms