Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Gm12286-201ENSMUST00000119246 1002 ntBASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Gm15432-201ENSMUST00000121106 195 ntBASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Gm13123-201ENSMUST00000122173 492 ntBASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Gm2541-201ENSMUST00000161209 711 ntBASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Gm18416-201ENSMUST00000175635 1003 ntBASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Gm5732-201ENSMUST00000182596 1007 ntBASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Gm29184-201ENSMUST00000190038 334 ntBASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 AC167977.2-201ENSMUST00000225676 682 ntBASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Ntng1-201ENSMUST00000051253 327 ntBASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Gm9873-201ENSMUST00000063891 1097 ntBASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Gm6655-201ENSMUST00000201932 1309 ntBASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx1-1G3UXB3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Gm3671-201ENSMUST00000182463 1007 ntBASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Gm9358-201ENSMUST00000183067 927 ntBASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Gm27552-201ENSMUST00000183351 62 ntBASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Gm27844-201ENSMUST00000183613 62 ntBASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 AC163667.3-201ENSMUST00000225774 222 ntBASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Gm45172-201ENSMUST00000206054 1301 ntBASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx1-1G3UXB3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nkx1-1G3UXB3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nkx1-1G3UXB3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nkx1-1G3UXB3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Nkx1-1G3UXB3 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC15.33■□□□□ 0.05
Nkx1-1G3UXB3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nkx1-1G3UXB3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx1-1G3UXB3 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.33■□□□□ 0.04
Nkx1-1G3UXB3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx1-1G3UXB3 Gm3675-201ENSMUST00000175904 1653 ntBASIC15.33■□□□□ 0.04
Nkx1-1G3UXB3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx1-1G3UXB3 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx1-1G3UXB3 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx1-1G3UXB3 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx1-1G3UXB3 Gm25545-201ENSMUST00000122673 323 ntBASIC15.33■□□□□ 0.04
Nkx1-1G3UXB3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx1-1G3UXB3 Gm13316-201ENSMUST00000140537 691 ntBASIC15.33■□□□□ 0.04
Nkx1-1G3UXB3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC15.33■□□□□ 0.04
Nkx1-1G3UXB3 Gm7666-201ENSMUST00000146631 819 ntBASIC15.33■□□□□ 0.04
Nkx1-1G3UXB3 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx1-1G3UXB3 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx1-1G3UXB3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx1-1G3UXB3 Gm26238-201ENSMUST00000175538 117 ntBASIC15.33■□□□□ 0.04
Nkx1-1G3UXB3 Gm25700-201ENSMUST00000177693 110 ntBASIC15.33■□□□□ 0.04
Nkx1-1G3UXB3 Gm26623-201ENSMUST00000180911 850 ntTSL 5 BASIC15.33■□□□□ 0.04
Nkx1-1G3UXB3 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx1-1G3UXB3 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC15.33■□□□□ 0.04
Nkx1-1G3UXB3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms