Protein–RNA interactions for Protein: F8VQC1

Srp72, Signal recognition particle subunit SRP72, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp72F8VQC1 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Srp72F8VQC1 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp72F8VQC1 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Srp72F8VQC1 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp72F8VQC1 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Srp72F8VQC1 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp72F8VQC1 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp72F8VQC1 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp72F8VQC1 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Srp72F8VQC1 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.7□□□□□ -0.38
Srp72F8VQC1 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp72F8VQC1 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp72F8VQC1 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Srp72F8VQC1 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp72F8VQC1 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Srp72F8VQC1 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Srp72F8VQC1 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp72F8VQC1 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp72F8VQC1 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp72F8VQC1 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.69□□□□□ -0.38
Srp72F8VQC1 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.69□□□□□ -0.38
Srp72F8VQC1 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.69□□□□□ -0.38
Srp72F8VQC1 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.69□□□□□ -0.38
Srp72F8VQC1 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp72F8VQC1 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Pck2-205ENSMUST00000226352 2784 ntBASIC12.68□□□□□ -0.38
Srp72F8VQC1 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Gm13689-201ENSMUST00000119360 685 ntBASIC12.68□□□□□ -0.38
Srp72F8VQC1 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.68□□□□□ -0.38
Srp72F8VQC1 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.68□□□□□ -0.38
Srp72F8VQC1 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp72F8VQC1 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.68□□□□□ -0.38
Srp72F8VQC1 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.67□□□□□ -0.38
Srp72F8VQC1 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp72F8VQC1 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Srp72F8VQC1 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Srp72F8VQC1 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp72F8VQC1 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp72F8VQC1 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Srp72F8VQC1 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Srp72F8VQC1 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp72F8VQC1 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp72F8VQC1 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp72F8VQC1 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp72F8VQC1 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp72F8VQC1 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp72F8VQC1 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp72F8VQC1 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Srp72F8VQC1 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms