Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Gm6152-201ENSMUST00000151704 340 ntBASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Gm18018-201ENSMUST00000198273 408 ntBASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Gm18473-201ENSMUST00000220543 868 ntBASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Gm13813-201ENSMUST00000120998 787 ntBASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Gm16372-201ENSMUST00000073088 450 ntBASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh9F8VPK8 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh9F8VPK8 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms