Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.11□□□□□ -0.31
Ccdc149F6V035 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Gm14921-201ENSMUST00000118643 908 ntBASIC13.11□□□□□ -0.31
Ccdc149F6V035 Gm15808-201ENSMUST00000119046 604 ntBASIC13.11□□□□□ -0.31
Ccdc149F6V035 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Gm14726-201ENSMUST00000120623 896 ntBASIC13.11□□□□□ -0.31
Ccdc149F6V035 Gm12291-201ENSMUST00000121627 311 ntBASIC13.11□□□□□ -0.31
Ccdc149F6V035 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.11□□□□□ -0.31
Ccdc149F6V035 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.11□□□□□ -0.31
Ccdc149F6V035 Gm18056-201ENSMUST00000207670 568 ntBASIC13.11□□□□□ -0.31
Ccdc149F6V035 Gm18061-201ENSMUST00000208350 562 ntBASIC13.11□□□□□ -0.31
Ccdc149F6V035 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.11□□□□□ -0.31
Ccdc149F6V035 Gm18063-201ENSMUST00000208529 568 ntBASIC13.11□□□□□ -0.31
Ccdc149F6V035 Gm18052-201ENSMUST00000208750 559 ntBASIC13.11□□□□□ -0.31
Ccdc149F6V035 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Gm30285-201ENSMUST00000214614 422 ntBASIC13.11□□□□□ -0.31
Ccdc149F6V035 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.11□□□□□ -0.31
Ccdc149F6V035 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.11□□□□□ -0.31
Ccdc149F6V035 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.11□□□□□ -0.31
Ccdc149F6V035 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc149F6V035 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.1□□□□□ -0.31
Ccdc149F6V035 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Gm6082-201ENSMUST00000215204 454 ntBASIC13.1□□□□□ -0.31
Ccdc149F6V035 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.1□□□□□ -0.31
Ccdc149F6V035 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.1□□□□□ -0.31
Ccdc149F6V035 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.1□□□□□ -0.31
Ccdc149F6V035 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.1□□□□□ -0.31
Ccdc149F6V035 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc149F6V035 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.09□□□□□ -0.31
Ccdc149F6V035 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms