Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Gm15240-201ENSMUST00000118156 720 ntBASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Mir1895-201ENSMUST00000122615 79 ntBASIC10.44□□□□□ -0.74
Gm12887B1AVM1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Mir6990-201ENSMUST00000183724 91 ntBASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Gm18905-201ENSMUST00000205454 928 ntBASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Gm17870-201ENSMUST00000219489 1174 ntBASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Gm10175-201ENSMUST00000086013 645 ntBASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Gm12887B1AVM1 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Gm8410-201ENSMUST00000117225 605 ntBASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Gm12585-201ENSMUST00000117307 290 ntBASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC10.43□□□□□ -0.74
Gm12887B1AVM1 H2af-ps-201ENSMUST00000119066 295 ntBASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.43□□□□□ -0.74
Gm12887B1AVM1 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm12887B1AVM1 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm12887B1AVM1 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Gm12887B1AVM1 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.42□□□□□ -0.74
Gm12887B1AVM1 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm12887B1AVM1 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Gm12887B1AVM1 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm12887B1AVM1 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm12887B1AVM1 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm12887B1AVM1 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm12887B1AVM1 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm12887B1AVM1 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm12887B1AVM1 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm12887B1AVM1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm12887B1AVM1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Gm12887B1AVM1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Gm12887B1AVM1 Gm4913-201ENSMUST00000117075 1290 ntBASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms