Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.4□□□□□ -0.74
Trav12d-1A0N8R0 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav12d-1A0N8R0 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav12d-1A0N8R0 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav12d-1A0N8R0 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trav12d-1A0N8R0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav12d-1A0N8R0 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav12d-1A0N8R0 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav12d-1A0N8R0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trav12d-1A0N8R0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav12d-1A0N8R0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav12d-1A0N8R0 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav12d-1A0N8R0 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav12d-1A0N8R0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Matn2-203ENSMUST00000226766 3252 ntBASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Gm27702-201ENSMUST00000184512 56 ntBASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Gm37171-201ENSMUST00000192636 1185 ntBASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav12d-1A0N8R0 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Gm15371-201ENSMUST00000117057 784 ntBASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Gm13813-201ENSMUST00000120998 787 ntBASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 AC126408.1-201ENSMUST00000225184 523 ntBASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms