Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm16296-201ENSMUST00000159905 325 ntBASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm6222-202ENSMUST00000182143 629 ntBASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm27731-201ENSMUST00000185192 107 ntBASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm38092-201ENSMUST00000195600 653 ntBASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm44942-201ENSMUST00000096093 2072 ntBASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm17435-202ENSMUST00000212699 1998 ntBASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm23931-201ENSMUST00000103842 109 ntBASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm12384-201ENSMUST00000119228 919 ntBASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm11425-201ENSMUST00000119608 498 ntBASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Gm9396-201ENSMUST00000076703 567 ntBASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atg4a-psA0A0G2JFS9 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms