Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 AC138767.1-201ENSMUST00000222661 415 ntBASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 AC154222.1-201ENSMUST00000223882 475 ntBASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 AC154572.2-201ENSMUST00000225105 997 ntBASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 AC127597.1-201ENSMUST00000225697 5711 ntBASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Gm6973-201ENSMUST00000117080 721 ntBASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Gm14140-201ENSMUST00000119999 995 ntBASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Gm18737-201ENSMUST00000173594 937 ntBASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Gm2651-201ENSMUST00000203560 838 ntBASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Gm6443-201ENSMUST00000203599 874 ntBASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 AC093022.5-201ENSMUST00000226841 1079 ntBASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Gm43860-201ENSMUST00000201742 2705 ntBASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC9.23□□□□□ -0.93
Trav8-1A0A075B641 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms