Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Smarcb1Q9Z0H3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Smarcb1Q9Z0H3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Smarcb1Q9Z0H3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Smarcb1Q9Z0H3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Smarcb1Q9Z0H3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Smarcb1Q9Z0H3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.1■■□□□ 1.13
Smarcb1Q9Z0H3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Smarcb1Q9Z0H3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
Smarcb1Q9Z0H3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Smarcb1Q9Z0H3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Smarcb1Q9Z0H3 Gm13241-201ENSMUST00000094493 780 ntBASIC22.09■■□□□ 1.13
Smarcb1Q9Z0H3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Smarcb1Q9Z0H3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Smarcb1Q9Z0H3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Smarcb1Q9Z0H3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Smarcb1Q9Z0H3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Smarcb1Q9Z0H3 Gm12922-201ENSMUST00000120626 809 ntBASIC22.08■■□□□ 1.13
Smarcb1Q9Z0H3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22.08■■□□□ 1.13
Smarcb1Q9Z0H3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Smarcb1Q9Z0H3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Smarcb1Q9Z0H3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.08■■□□□ 1.13
Smarcb1Q9Z0H3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Smarcb1Q9Z0H3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.07■■□□□ 1.12
Smarcb1Q9Z0H3 Gm9847-201ENSMUST00000052528 599 ntBASIC22.07■■□□□ 1.12
Smarcb1Q9Z0H3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Smarcb1Q9Z0H3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Smarcb1Q9Z0H3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Smarcb1Q9Z0H3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Smarcb1Q9Z0H3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Smarcb1Q9Z0H3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Smarcb1Q9Z0H3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Smarcb1Q9Z0H3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Smarcb1Q9Z0H3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.06■■□□□ 1.12
Smarcb1Q9Z0H3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Smarcb1Q9Z0H3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Smarcb1Q9Z0H3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Smarcb1Q9Z0H3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Smarcb1Q9Z0H3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Smarcb1Q9Z0H3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Smarcb1Q9Z0H3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Smarcb1Q9Z0H3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Smarcb1Q9Z0H3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Smarcb1Q9Z0H3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Smarcb1Q9Z0H3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.05■■□□□ 1.12
Smarcb1Q9Z0H3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Smarcb1Q9Z0H3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Smarcb1Q9Z0H3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Smarcb1Q9Z0H3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Smarcb1Q9Z0H3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Smarcb1Q9Z0H3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Smarcb1Q9Z0H3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Smarcb1Q9Z0H3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Smarcb1Q9Z0H3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Smarcb1Q9Z0H3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Smarcb1Q9Z0H3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Smarcb1Q9Z0H3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Smarcb1Q9Z0H3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC22.02■■□□□ 1.12
Smarcb1Q9Z0H3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Smarcb1Q9Z0H3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Smarcb1Q9Z0H3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Smarcb1Q9Z0H3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Smarcb1Q9Z0H3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Smarcb1Q9Z0H3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.01■■□□□ 1.11
Smarcb1Q9Z0H3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Smarcb1Q9Z0H3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Smarcb1Q9Z0H3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22■■□□□ 1.11
Smarcb1Q9Z0H3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22■■□□□ 1.11
Smarcb1Q9Z0H3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Smarcb1Q9Z0H3 Gm15039-201ENSMUST00000118914 875 ntBASIC22■■□□□ 1.11
Smarcb1Q9Z0H3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Smarcb1Q9Z0H3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Smarcb1Q9Z0H3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Smarcb1Q9Z0H3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Smarcb1Q9Z0H3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.99■■□□□ 1.11
Smarcb1Q9Z0H3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.99■■□□□ 1.11
Smarcb1Q9Z0H3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Smarcb1Q9Z0H3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Smarcb1Q9Z0H3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Smarcb1Q9Z0H3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Smarcb1Q9Z0H3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Smarcb1Q9Z0H3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Smarcb1Q9Z0H3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Smarcb1Q9Z0H3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smarcb1Q9Z0H3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Smarcb1Q9Z0H3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.97■■□□□ 1.11
Smarcb1Q9Z0H3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.97■■□□□ 1.11
Smarcb1Q9Z0H3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Smarcb1Q9Z0H3 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.97■■□□□ 1.11
Smarcb1Q9Z0H3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.96■■□□□ 1.11
Smarcb1Q9Z0H3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.96■■□□□ 1.11
Smarcb1Q9Z0H3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smarcb1Q9Z0H3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smarcb1Q9Z0H3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smarcb1Q9Z0H3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.95■■□□□ 1.1
Smarcb1Q9Z0H3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.95■■□□□ 1.1
Smarcb1Q9Z0H3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smarcb1Q9Z0H3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Smarcb1Q9Z0H3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smarcb1Q9Z0H3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms