Protein–RNA interactions for Protein: Q9WUB6

Clcnkb, Chloride channel protein ClC-Kb, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkbQ9WUB6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ClcnkbQ9WUB6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ClcnkbQ9WUB6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
ClcnkbQ9WUB6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.93■□□□□ 0.94
ClcnkbQ9WUB6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.93■□□□□ 0.94
ClcnkbQ9WUB6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ClcnkbQ9WUB6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ClcnkbQ9WUB6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ClcnkbQ9WUB6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ClcnkbQ9WUB6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ClcnkbQ9WUB6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.92■□□□□ 0.94
ClcnkbQ9WUB6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ClcnkbQ9WUB6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ClcnkbQ9WUB6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ClcnkbQ9WUB6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ClcnkbQ9WUB6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
ClcnkbQ9WUB6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ClcnkbQ9WUB6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ClcnkbQ9WUB6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ClcnkbQ9WUB6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ClcnkbQ9WUB6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ClcnkbQ9WUB6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ClcnkbQ9WUB6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ClcnkbQ9WUB6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ClcnkbQ9WUB6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ClcnkbQ9WUB6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ClcnkbQ9WUB6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ClcnkbQ9WUB6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
ClcnkbQ9WUB6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
ClcnkbQ9WUB6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ClcnkbQ9WUB6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ClcnkbQ9WUB6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
ClcnkbQ9WUB6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
ClcnkbQ9WUB6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ClcnkbQ9WUB6 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.89■□□□□ 0.93
ClcnkbQ9WUB6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.89■□□□□ 0.93
ClcnkbQ9WUB6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ClcnkbQ9WUB6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ClcnkbQ9WUB6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ClcnkbQ9WUB6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ClcnkbQ9WUB6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ClcnkbQ9WUB6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.88■□□□□ 0.93
ClcnkbQ9WUB6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.88■□□□□ 0.93
ClcnkbQ9WUB6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.88■□□□□ 0.93
ClcnkbQ9WUB6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.88■□□□□ 0.93
ClcnkbQ9WUB6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ClcnkbQ9WUB6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
ClcnkbQ9WUB6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ClcnkbQ9WUB6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ClcnkbQ9WUB6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ClcnkbQ9WUB6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ClcnkbQ9WUB6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ClcnkbQ9WUB6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ClcnkbQ9WUB6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ClcnkbQ9WUB6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.86■□□□□ 0.93
ClcnkbQ9WUB6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ClcnkbQ9WUB6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ClcnkbQ9WUB6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ClcnkbQ9WUB6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ClcnkbQ9WUB6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ClcnkbQ9WUB6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ClcnkbQ9WUB6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ClcnkbQ9WUB6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
ClcnkbQ9WUB6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ClcnkbQ9WUB6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.84■□□□□ 0.93
ClcnkbQ9WUB6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ClcnkbQ9WUB6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ClcnkbQ9WUB6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ClcnkbQ9WUB6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ClcnkbQ9WUB6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ClcnkbQ9WUB6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.83■□□□□ 0.92
ClcnkbQ9WUB6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ClcnkbQ9WUB6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ClcnkbQ9WUB6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ClcnkbQ9WUB6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ClcnkbQ9WUB6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ClcnkbQ9WUB6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ClcnkbQ9WUB6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ClcnkbQ9WUB6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ClcnkbQ9WUB6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ClcnkbQ9WUB6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ClcnkbQ9WUB6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ClcnkbQ9WUB6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
ClcnkbQ9WUB6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ClcnkbQ9WUB6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ClcnkbQ9WUB6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ClcnkbQ9WUB6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
ClcnkbQ9WUB6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ClcnkbQ9WUB6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ClcnkbQ9WUB6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ClcnkbQ9WUB6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.8■□□□□ 0.92
ClcnkbQ9WUB6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ClcnkbQ9WUB6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ClcnkbQ9WUB6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ClcnkbQ9WUB6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ClcnkbQ9WUB6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ClcnkbQ9WUB6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ClcnkbQ9WUB6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ClcnkbQ9WUB6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ClcnkbQ9WUB6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms