Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col13a1Q9R1N9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col13a1Q9R1N9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col13a1Q9R1N9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.93■□□□□ 0.46
Col13a1Q9R1N9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col13a1Q9R1N9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Col13a1Q9R1N9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col13a1Q9R1N9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col13a1Q9R1N9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col13a1Q9R1N9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col13a1Q9R1N9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Col13a1Q9R1N9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col13a1Q9R1N9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col13a1Q9R1N9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col13a1Q9R1N9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col13a1Q9R1N9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.92■□□□□ 0.46
Col13a1Q9R1N9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col13a1Q9R1N9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col13a1Q9R1N9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col13a1Q9R1N9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col13a1Q9R1N9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.91■□□□□ 0.46
Col13a1Q9R1N9 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.91■□□□□ 0.46
Col13a1Q9R1N9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.91■□□□□ 0.46
Col13a1Q9R1N9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col13a1Q9R1N9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col13a1Q9R1N9 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.91■□□□□ 0.46
Col13a1Q9R1N9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col13a1Q9R1N9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.91■□□□□ 0.46
Col13a1Q9R1N9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col13a1Q9R1N9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col13a1Q9R1N9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col13a1Q9R1N9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col13a1Q9R1N9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Col13a1Q9R1N9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.9■□□□□ 0.46
Col13a1Q9R1N9 Gm10399-202ENSMUST00000202768 748 ntBASIC17.9■□□□□ 0.46
Col13a1Q9R1N9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col13a1Q9R1N9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col13a1Q9R1N9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Col13a1Q9R1N9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col13a1Q9R1N9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col13a1Q9R1N9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Col13a1Q9R1N9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col13a1Q9R1N9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
Col13a1Q9R1N9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.89■□□□□ 0.45
Col13a1Q9R1N9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col13a1Q9R1N9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Col13a1Q9R1N9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col13a1Q9R1N9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Col13a1Q9R1N9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col13a1Q9R1N9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col13a1Q9R1N9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col13a1Q9R1N9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.88■□□□□ 0.45
Col13a1Q9R1N9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col13a1Q9R1N9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.88■□□□□ 0.45
Col13a1Q9R1N9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Col13a1Q9R1N9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col13a1Q9R1N9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Col13a1Q9R1N9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col13a1Q9R1N9 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.87■□□□□ 0.45
Col13a1Q9R1N9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col13a1Q9R1N9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
Col13a1Q9R1N9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Col13a1Q9R1N9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col13a1Q9R1N9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col13a1Q9R1N9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.87■□□□□ 0.45
Col13a1Q9R1N9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col13a1Q9R1N9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.87■□□□□ 0.45
Col13a1Q9R1N9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col13a1Q9R1N9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col13a1Q9R1N9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col13a1Q9R1N9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col13a1Q9R1N9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col13a1Q9R1N9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col13a1Q9R1N9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col13a1Q9R1N9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col13a1Q9R1N9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col13a1Q9R1N9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col13a1Q9R1N9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col13a1Q9R1N9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.86■□□□□ 0.45
Col13a1Q9R1N9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col13a1Q9R1N9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
Col13a1Q9R1N9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col13a1Q9R1N9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col13a1Q9R1N9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.86■□□□□ 0.45
Col13a1Q9R1N9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Col13a1Q9R1N9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Col13a1Q9R1N9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col13a1Q9R1N9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col13a1Q9R1N9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.85■□□□□ 0.45
Col13a1Q9R1N9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.85■□□□□ 0.45
Col13a1Q9R1N9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col13a1Q9R1N9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.85■□□□□ 0.45
Col13a1Q9R1N9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
Col13a1Q9R1N9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col13a1Q9R1N9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col13a1Q9R1N9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col13a1Q9R1N9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col13a1Q9R1N9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col13a1Q9R1N9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col13a1Q9R1N9 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 128.3 ms