Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nubp1Q9R060 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.39■□□□□ 0.53
Nubp1Q9R060 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Nubp1Q9R060 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
Nubp1Q9R060 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nubp1Q9R060 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nubp1Q9R060 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nubp1Q9R060 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nubp1Q9R060 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nubp1Q9R060 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nubp1Q9R060 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nubp1Q9R060 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.38■□□□□ 0.53
Nubp1Q9R060 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.38■□□□□ 0.53
Nubp1Q9R060 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.38■□□□□ 0.53
Nubp1Q9R060 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nubp1Q9R060 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Nubp1Q9R060 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nubp1Q9R060 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nubp1Q9R060 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nubp1Q9R060 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nubp1Q9R060 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.38■□□□□ 0.53
Nubp1Q9R060 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nubp1Q9R060 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Nubp1Q9R060 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nubp1Q9R060 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nubp1Q9R060 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nubp1Q9R060 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nubp1Q9R060 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nubp1Q9R060 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nubp1Q9R060 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nubp1Q9R060 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nubp1Q9R060 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.37■□□□□ 0.53
Nubp1Q9R060 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nubp1Q9R060 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nubp1Q9R060 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nubp1Q9R060 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nubp1Q9R060 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.37■□□□□ 0.53
Nubp1Q9R060 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nubp1Q9R060 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nubp1Q9R060 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nubp1Q9R060 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.36■□□□□ 0.53
Nubp1Q9R060 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nubp1Q9R060 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nubp1Q9R060 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.36■□□□□ 0.53
Nubp1Q9R060 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.36■□□□□ 0.53
Nubp1Q9R060 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nubp1Q9R060 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nubp1Q9R060 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nubp1Q9R060 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nubp1Q9R060 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nubp1Q9R060 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.35■□□□□ 0.53
Nubp1Q9R060 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nubp1Q9R060 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.35■□□□□ 0.53
Nubp1Q9R060 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.35■□□□□ 0.53
Nubp1Q9R060 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Nubp1Q9R060 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.35■□□□□ 0.53
Nubp1Q9R060 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Nubp1Q9R060 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nubp1Q9R060 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.34■□□□□ 0.53
Nubp1Q9R060 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Nubp1Q9R060 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nubp1Q9R060 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.34■□□□□ 0.53
Nubp1Q9R060 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nubp1Q9R060 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nubp1Q9R060 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nubp1Q9R060 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Nubp1Q9R060 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nubp1Q9R060 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nubp1Q9R060 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nubp1Q9R060 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nubp1Q9R060 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nubp1Q9R060 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nubp1Q9R060 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.33■□□□□ 0.52
Nubp1Q9R060 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.33■□□□□ 0.52
Nubp1Q9R060 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nubp1Q9R060 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nubp1Q9R060 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Nubp1Q9R060 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nubp1Q9R060 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.32■□□□□ 0.52
Nubp1Q9R060 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nubp1Q9R060 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Nubp1Q9R060 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
Nubp1Q9R060 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nubp1Q9R060 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nubp1Q9R060 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nubp1Q9R060 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nubp1Q9R060 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nubp1Q9R060 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nubp1Q9R060 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nubp1Q9R060 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nubp1Q9R060 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nubp1Q9R060 Gm6139-201ENSMUST00000079261 882 ntBASIC18.31■□□□□ 0.52
Nubp1Q9R060 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nubp1Q9R060 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nubp1Q9R060 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nubp1Q9R060 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Nubp1Q9R060 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Nubp1Q9R060 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nubp1Q9R060 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nubp1Q9R060 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms