Protein–RNA interactions for Protein: Q9QUK6

Tlr4, Toll-like receptor 4, mousemouse

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr4Q9QUK6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tlr4Q9QUK6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tlr4Q9QUK6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.79■□□□□ 0.92
Tlr4Q9QUK6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.79■□□□□ 0.92
Tlr4Q9QUK6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tlr4Q9QUK6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tlr4Q9QUK6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tlr4Q9QUK6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tlr4Q9QUK6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Tlr4Q9QUK6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tlr4Q9QUK6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tlr4Q9QUK6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tlr4Q9QUK6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Tlr4Q9QUK6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tlr4Q9QUK6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tlr4Q9QUK6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tlr4Q9QUK6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tlr4Q9QUK6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tlr4Q9QUK6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.77■□□□□ 0.92
Tlr4Q9QUK6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.77■□□□□ 0.92
Tlr4Q9QUK6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.77■□□□□ 0.92
Tlr4Q9QUK6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tlr4Q9QUK6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tlr4Q9QUK6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tlr4Q9QUK6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tlr4Q9QUK6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tlr4Q9QUK6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tlr4Q9QUK6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tlr4Q9QUK6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.76■□□□□ 0.91
Tlr4Q9QUK6 Gm40881-201ENSMUST00000223397 166 ntBASIC20.76■□□□□ 0.91
Tlr4Q9QUK6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Tlr4Q9QUK6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tlr4Q9QUK6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tlr4Q9QUK6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tlr4Q9QUK6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tlr4Q9QUK6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tlr4Q9QUK6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tlr4Q9QUK6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tlr4Q9QUK6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.75■□□□□ 0.91
Tlr4Q9QUK6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tlr4Q9QUK6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.75■□□□□ 0.91
Tlr4Q9QUK6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tlr4Q9QUK6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tlr4Q9QUK6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.74■□□□□ 0.91
Tlr4Q9QUK6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tlr4Q9QUK6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tlr4Q9QUK6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Tlr4Q9QUK6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tlr4Q9QUK6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tlr4Q9QUK6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tlr4Q9QUK6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tlr4Q9QUK6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tlr4Q9QUK6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tlr4Q9QUK6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.73■□□□□ 0.91
Tlr4Q9QUK6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Tlr4Q9QUK6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tlr4Q9QUK6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Tlr4Q9QUK6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tlr4Q9QUK6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.73■□□□□ 0.91
Tlr4Q9QUK6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Tlr4Q9QUK6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tlr4Q9QUK6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tlr4Q9QUK6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tlr4Q9QUK6 Gm10399-202ENSMUST00000202768 748 ntBASIC20.72■□□□□ 0.91
Tlr4Q9QUK6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tlr4Q9QUK6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tlr4Q9QUK6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.72■□□□□ 0.91
Tlr4Q9QUK6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tlr4Q9QUK6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Tlr4Q9QUK6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tlr4Q9QUK6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Tlr4Q9QUK6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tlr4Q9QUK6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.71■□□□□ 0.91
Tlr4Q9QUK6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Tlr4Q9QUK6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Tlr4Q9QUK6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
Tlr4Q9QUK6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Tlr4Q9QUK6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tlr4Q9QUK6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.7■□□□□ 0.9
Tlr4Q9QUK6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tlr4Q9QUK6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tlr4Q9QUK6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.7■□□□□ 0.9
Tlr4Q9QUK6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tlr4Q9QUK6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tlr4Q9QUK6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tlr4Q9QUK6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tlr4Q9QUK6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tlr4Q9QUK6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tlr4Q9QUK6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tlr4Q9QUK6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Tlr4Q9QUK6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Tlr4Q9QUK6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Tlr4Q9QUK6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Tlr4Q9QUK6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tlr4Q9QUK6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Tlr4Q9QUK6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tlr4Q9QUK6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tlr4Q9QUK6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.68■□□□□ 0.9
Tlr4Q9QUK6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tlr4Q9QUK6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms