Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.3■■□□□ 1.16
Scn5aQ9JJV9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Scn5aQ9JJV9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Scn5aQ9JJV9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Scn5aQ9JJV9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Scn5aQ9JJV9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Scn5aQ9JJV9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Scn5aQ9JJV9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Scn5aQ9JJV9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC22.3■■□□□ 1.16
Scn5aQ9JJV9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Scn5aQ9JJV9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Scn5aQ9JJV9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Scn5aQ9JJV9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22.28■■□□□ 1.16
Scn5aQ9JJV9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Scn5aQ9JJV9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Scn5aQ9JJV9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Scn5aQ9JJV9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
Scn5aQ9JJV9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Scn5aQ9JJV9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.28■■□□□ 1.16
Scn5aQ9JJV9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Scn5aQ9JJV9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Scn5aQ9JJV9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC22.27■■□□□ 1.16
Scn5aQ9JJV9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC22.27■■□□□ 1.15
Scn5aQ9JJV9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Scn5aQ9JJV9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Scn5aQ9JJV9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Scn5aQ9JJV9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Scn5aQ9JJV9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Scn5aQ9JJV9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Scn5aQ9JJV9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Scn5aQ9JJV9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC22.25■■□□□ 1.15
Scn5aQ9JJV9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Scn5aQ9JJV9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Scn5aQ9JJV9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Scn5aQ9JJV9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC22.24■■□□□ 1.15
Scn5aQ9JJV9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC22.24■■□□□ 1.15
Scn5aQ9JJV9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Scn5aQ9JJV9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Scn5aQ9JJV9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Scn5aQ9JJV9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Scn5aQ9JJV9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Scn5aQ9JJV9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Scn5aQ9JJV9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Scn5aQ9JJV9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC22.22■■□□□ 1.15
Scn5aQ9JJV9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Scn5aQ9JJV9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Scn5aQ9JJV9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Scn5aQ9JJV9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Scn5aQ9JJV9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Scn5aQ9JJV9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Scn5aQ9JJV9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Scn5aQ9JJV9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Scn5aQ9JJV9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Scn5aQ9JJV9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Scn5aQ9JJV9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Scn5aQ9JJV9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Scn5aQ9JJV9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Scn5aQ9JJV9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Scn5aQ9JJV9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.2■■□□□ 1.14
Scn5aQ9JJV9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.19■■□□□ 1.14
Scn5aQ9JJV9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Scn5aQ9JJV9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Scn5aQ9JJV9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Scn5aQ9JJV9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Scn5aQ9JJV9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Scn5aQ9JJV9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Scn5aQ9JJV9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Scn5aQ9JJV9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Scn5aQ9JJV9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Scn5aQ9JJV9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Scn5aQ9JJV9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
Scn5aQ9JJV9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Scn5aQ9JJV9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Scn5aQ9JJV9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC22.18■■□□□ 1.14
Scn5aQ9JJV9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Scn5aQ9JJV9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Scn5aQ9JJV9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Scn5aQ9JJV9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Scn5aQ9JJV9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Scn5aQ9JJV9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Scn5aQ9JJV9 Slc35b2-207ENSMUST00000226086 850 ntBASIC22.16■■□□□ 1.14
Scn5aQ9JJV9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Scn5aQ9JJV9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Scn5aQ9JJV9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Scn5aQ9JJV9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Scn5aQ9JJV9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC22.16■■□□□ 1.14
Scn5aQ9JJV9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Scn5aQ9JJV9 Gm2011-201ENSMUST00000203124 1263 ntBASIC22.16■■□□□ 1.14
Scn5aQ9JJV9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Scn5aQ9JJV9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Scn5aQ9JJV9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Scn5aQ9JJV9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Scn5aQ9JJV9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC22.15■■□□□ 1.14
Scn5aQ9JJV9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Scn5aQ9JJV9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC22.15■■□□□ 1.14
Scn5aQ9JJV9 Gm43137-201ENSMUST00000198052 594 ntBASIC22.15■■□□□ 1.14
Scn5aQ9JJV9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Scn5aQ9JJV9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC22.14■■□□□ 1.14
Scn5aQ9JJV9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Scn5aQ9JJV9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 235.8 ms