Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rcl1Q9JJT0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rcl1Q9JJT0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rcl1Q9JJT0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rcl1Q9JJT0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rcl1Q9JJT0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rcl1Q9JJT0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rcl1Q9JJT0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.74■□□□□ 0.43
Rcl1Q9JJT0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rcl1Q9JJT0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rcl1Q9JJT0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.74■□□□□ 0.43
Rcl1Q9JJT0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rcl1Q9JJT0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rcl1Q9JJT0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Rcl1Q9JJT0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rcl1Q9JJT0 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.74■□□□□ 0.43
Rcl1Q9JJT0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rcl1Q9JJT0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rcl1Q9JJT0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rcl1Q9JJT0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rcl1Q9JJT0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rcl1Q9JJT0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Rcl1Q9JJT0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rcl1Q9JJT0 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.72■□□□□ 0.43
Rcl1Q9JJT0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rcl1Q9JJT0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rcl1Q9JJT0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rcl1Q9JJT0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rcl1Q9JJT0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rcl1Q9JJT0 Gm14523-201ENSMUST00000117260 558 ntBASIC17.72■□□□□ 0.43
Rcl1Q9JJT0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rcl1Q9JJT0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.72■□□□□ 0.43
Rcl1Q9JJT0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rcl1Q9JJT0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rcl1Q9JJT0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rcl1Q9JJT0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rcl1Q9JJT0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rcl1Q9JJT0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rcl1Q9JJT0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rcl1Q9JJT0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rcl1Q9JJT0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rcl1Q9JJT0 Gm7332-201ENSMUST00000118351 454 ntBASIC17.71■□□□□ 0.43
Rcl1Q9JJT0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Rcl1Q9JJT0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.71■□□□□ 0.43
Rcl1Q9JJT0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rcl1Q9JJT0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rcl1Q9JJT0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rcl1Q9JJT0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rcl1Q9JJT0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rcl1Q9JJT0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rcl1Q9JJT0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rcl1Q9JJT0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Rcl1Q9JJT0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rcl1Q9JJT0 Gm44428-201ENSMUST00000204474 874 ntBASIC17.69■□□□□ 0.42
Rcl1Q9JJT0 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.69■□□□□ 0.42
Rcl1Q9JJT0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rcl1Q9JJT0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rcl1Q9JJT0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rcl1Q9JJT0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.69■□□□□ 0.42
Rcl1Q9JJT0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.68■□□□□ 0.42
Rcl1Q9JJT0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rcl1Q9JJT0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rcl1Q9JJT0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rcl1Q9JJT0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rcl1Q9JJT0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rcl1Q9JJT0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rcl1Q9JJT0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rcl1Q9JJT0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rcl1Q9JJT0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rcl1Q9JJT0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.67■□□□□ 0.42
Rcl1Q9JJT0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rcl1Q9JJT0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rcl1Q9JJT0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.66■□□□□ 0.42
Rcl1Q9JJT0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rcl1Q9JJT0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rcl1Q9JJT0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rcl1Q9JJT0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.66■□□□□ 0.42
Rcl1Q9JJT0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rcl1Q9JJT0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rcl1Q9JJT0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.65■□□□□ 0.42
Rcl1Q9JJT0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rcl1Q9JJT0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rcl1Q9JJT0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rcl1Q9JJT0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rcl1Q9JJT0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Rcl1Q9JJT0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rcl1Q9JJT0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rcl1Q9JJT0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rcl1Q9JJT0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rcl1Q9JJT0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rcl1Q9JJT0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rcl1Q9JJT0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rcl1Q9JJT0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rcl1Q9JJT0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rcl1Q9JJT0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rcl1Q9JJT0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.64■□□□□ 0.41
Rcl1Q9JJT0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rcl1Q9JJT0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.64■□□□□ 0.41
Rcl1Q9JJT0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rcl1Q9JJT0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms