Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.99■□□□□ 0.95
Tubb3Q9ERD7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tubb3Q9ERD7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tubb3Q9ERD7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Tubb3Q9ERD7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tubb3Q9ERD7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tubb3Q9ERD7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tubb3Q9ERD7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tubb3Q9ERD7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tubb3Q9ERD7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
Tubb3Q9ERD7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tubb3Q9ERD7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tubb3Q9ERD7 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.98■□□□□ 0.95
Tubb3Q9ERD7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tubb3Q9ERD7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
Tubb3Q9ERD7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tubb3Q9ERD7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tubb3Q9ERD7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tubb3Q9ERD7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.97■□□□□ 0.95
Tubb3Q9ERD7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tubb3Q9ERD7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tubb3Q9ERD7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tubb3Q9ERD7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tubb3Q9ERD7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tubb3Q9ERD7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tubb3Q9ERD7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Tubb3Q9ERD7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tubb3Q9ERD7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Tubb3Q9ERD7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tubb3Q9ERD7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Tubb3Q9ERD7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Tubb3Q9ERD7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tubb3Q9ERD7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tubb3Q9ERD7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Tubb3Q9ERD7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tubb3Q9ERD7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tubb3Q9ERD7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Tubb3Q9ERD7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tubb3Q9ERD7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Tubb3Q9ERD7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.95■□□□□ 0.94
Tubb3Q9ERD7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.95■□□□□ 0.94
Tubb3Q9ERD7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tubb3Q9ERD7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tubb3Q9ERD7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.95■□□□□ 0.94
Tubb3Q9ERD7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tubb3Q9ERD7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tubb3Q9ERD7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tubb3Q9ERD7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tubb3Q9ERD7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tubb3Q9ERD7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Tubb3Q9ERD7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.94■□□□□ 0.94
Tubb3Q9ERD7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tubb3Q9ERD7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tubb3Q9ERD7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Tubb3Q9ERD7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Tubb3Q9ERD7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tubb3Q9ERD7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Tubb3Q9ERD7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tubb3Q9ERD7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tubb3Q9ERD7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.93■□□□□ 0.94
Tubb3Q9ERD7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Tubb3Q9ERD7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tubb3Q9ERD7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
Tubb3Q9ERD7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Tubb3Q9ERD7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tubb3Q9ERD7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Tubb3Q9ERD7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tubb3Q9ERD7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.92■□□□□ 0.94
Tubb3Q9ERD7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tubb3Q9ERD7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tubb3Q9ERD7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tubb3Q9ERD7 Gm15546-201ENSMUST00000122095 826 ntBASIC20.91■□□□□ 0.94
Tubb3Q9ERD7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Tubb3Q9ERD7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tubb3Q9ERD7 Gm45444-201ENSMUST00000211394 898 ntBASIC20.91■□□□□ 0.94
Tubb3Q9ERD7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tubb3Q9ERD7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tubb3Q9ERD7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tubb3Q9ERD7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tubb3Q9ERD7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tubb3Q9ERD7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.9■□□□□ 0.94
Tubb3Q9ERD7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tubb3Q9ERD7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Tubb3Q9ERD7 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tubb3Q9ERD7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tubb3Q9ERD7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tubb3Q9ERD7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Tubb3Q9ERD7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tubb3Q9ERD7 Gm43566-201ENSMUST00000196851 808 ntBASIC20.89■□□□□ 0.93
Tubb3Q9ERD7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tubb3Q9ERD7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tubb3Q9ERD7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tubb3Q9ERD7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tubb3Q9ERD7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Tubb3Q9ERD7 Gm13238-201ENSMUST00000117655 780 ntBASIC20.88■□□□□ 0.93
Tubb3Q9ERD7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Tubb3Q9ERD7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tubb3Q9ERD7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.87■□□□□ 0.93
Tubb3Q9ERD7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tubb3Q9ERD7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms