Protein–RNA interactions for Protein: Q9D7U6

Cldn22, Claudin-22, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn22Q9D7U6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cldn22Q9D7U6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cldn22Q9D7U6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cldn22Q9D7U6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.24■□□□□ 0.99
Cldn22Q9D7U6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cldn22Q9D7U6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.24■□□□□ 0.99
Cldn22Q9D7U6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.24■□□□□ 0.99
Cldn22Q9D7U6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cldn22Q9D7U6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cldn22Q9D7U6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Cldn22Q9D7U6 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.23■□□□□ 0.99
Cldn22Q9D7U6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
Cldn22Q9D7U6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cldn22Q9D7U6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cldn22Q9D7U6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cldn22Q9D7U6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.22■□□□□ 0.99
Cldn22Q9D7U6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.22■□□□□ 0.99
Cldn22Q9D7U6 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.22■□□□□ 0.99
Cldn22Q9D7U6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cldn22Q9D7U6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cldn22Q9D7U6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cldn22Q9D7U6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cldn22Q9D7U6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Cldn22Q9D7U6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cldn22Q9D7U6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cldn22Q9D7U6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Cldn22Q9D7U6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cldn22Q9D7U6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cldn22Q9D7U6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Cldn22Q9D7U6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cldn22Q9D7U6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cldn22Q9D7U6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cldn22Q9D7U6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cldn22Q9D7U6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cldn22Q9D7U6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cldn22Q9D7U6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cldn22Q9D7U6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cldn22Q9D7U6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cldn22Q9D7U6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Cldn22Q9D7U6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Cldn22Q9D7U6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.18■□□□□ 0.98
Cldn22Q9D7U6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cldn22Q9D7U6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Cldn22Q9D7U6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cldn22Q9D7U6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.18■□□□□ 0.98
Cldn22Q9D7U6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cldn22Q9D7U6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cldn22Q9D7U6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.18■□□□□ 0.98
Cldn22Q9D7U6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cldn22Q9D7U6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.17■□□□□ 0.98
Cldn22Q9D7U6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Cldn22Q9D7U6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cldn22Q9D7U6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cldn22Q9D7U6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cldn22Q9D7U6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cldn22Q9D7U6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Cldn22Q9D7U6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.16■□□□□ 0.98
Cldn22Q9D7U6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cldn22Q9D7U6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cldn22Q9D7U6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Cldn22Q9D7U6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Cldn22Q9D7U6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Cldn22Q9D7U6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cldn22Q9D7U6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn22Q9D7U6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cldn22Q9D7U6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn22Q9D7U6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn22Q9D7U6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
Cldn22Q9D7U6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cldn22Q9D7U6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cldn22Q9D7U6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cldn22Q9D7U6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cldn22Q9D7U6 Notumos-201ENSMUST00000151998 2659 ntBASIC21.13■□□□□ 0.97
Cldn22Q9D7U6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.13■□□□□ 0.97
Cldn22Q9D7U6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn22Q9D7U6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.13■□□□□ 0.97
Cldn22Q9D7U6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn22Q9D7U6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn22Q9D7U6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn22Q9D7U6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn22Q9D7U6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn22Q9D7U6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn22Q9D7U6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.12■□□□□ 0.97
Cldn22Q9D7U6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.12■□□□□ 0.97
Cldn22Q9D7U6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn22Q9D7U6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn22Q9D7U6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Cldn22Q9D7U6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn22Q9D7U6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Cldn22Q9D7U6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn22Q9D7U6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn22Q9D7U6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn22Q9D7U6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn22Q9D7U6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn22Q9D7U6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Cldn22Q9D7U6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn22Q9D7U6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn22Q9D7U6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn22Q9D7U6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn22Q9D7U6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms