Protein–RNA interactions for Protein: Q9D0P8

Ift27, Intraflagellar transport protein 27 homolog, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift27Q9D0P8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ift27Q9D0P8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ift27Q9D0P8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ift27Q9D0P8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ift27Q9D0P8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.26■□□□□ 0.67
Ift27Q9D0P8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ift27Q9D0P8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ift27Q9D0P8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.25■□□□□ 0.67
Ift27Q9D0P8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ift27Q9D0P8 Gm9812-201ENSMUST00000061934 968 ntBASIC19.25■□□□□ 0.67
Ift27Q9D0P8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ift27Q9D0P8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ift27Q9D0P8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ift27Q9D0P8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ift27Q9D0P8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ift27Q9D0P8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ift27Q9D0P8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ift27Q9D0P8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ift27Q9D0P8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.24■□□□□ 0.67
Ift27Q9D0P8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ift27Q9D0P8 Gm4799-201ENSMUST00000095396 657 ntBASIC19.24■□□□□ 0.67
Ift27Q9D0P8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ift27Q9D0P8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ift27Q9D0P8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.24■□□□□ 0.67
Ift27Q9D0P8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ift27Q9D0P8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ift27Q9D0P8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ift27Q9D0P8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ift27Q9D0P8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ift27Q9D0P8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ift27Q9D0P8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ift27Q9D0P8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.23■□□□□ 0.67
Ift27Q9D0P8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ift27Q9D0P8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ift27Q9D0P8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ift27Q9D0P8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ift27Q9D0P8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ift27Q9D0P8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ift27Q9D0P8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ift27Q9D0P8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ift27Q9D0P8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Ift27Q9D0P8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ift27Q9D0P8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ift27Q9D0P8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ift27Q9D0P8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ift27Q9D0P8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ift27Q9D0P8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ift27Q9D0P8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ift27Q9D0P8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ift27Q9D0P8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ift27Q9D0P8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Ift27Q9D0P8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ift27Q9D0P8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ift27Q9D0P8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ift27Q9D0P8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ift27Q9D0P8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ift27Q9D0P8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ift27Q9D0P8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ift27Q9D0P8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ift27Q9D0P8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.19■□□□□ 0.66
Ift27Q9D0P8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ift27Q9D0P8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ift27Q9D0P8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ift27Q9D0P8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ift27Q9D0P8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.18■□□□□ 0.66
Ift27Q9D0P8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ift27Q9D0P8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.18■□□□□ 0.66
Ift27Q9D0P8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ift27Q9D0P8 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.18■□□□□ 0.66
Ift27Q9D0P8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ift27Q9D0P8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ift27Q9D0P8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ift27Q9D0P8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.17■□□□□ 0.66
Ift27Q9D0P8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ift27Q9D0P8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ift27Q9D0P8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ift27Q9D0P8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ift27Q9D0P8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ift27Q9D0P8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ift27Q9D0P8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ift27Q9D0P8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ift27Q9D0P8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ift27Q9D0P8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ift27Q9D0P8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.16■□□□□ 0.66
Ift27Q9D0P8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ift27Q9D0P8 Terc-201ENSMUST00000082862 423 ntBASIC19.16■□□□□ 0.66
Ift27Q9D0P8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.16■□□□□ 0.66
Ift27Q9D0P8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ift27Q9D0P8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ift27Q9D0P8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ift27Q9D0P8 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.16■□□□□ 0.66
Ift27Q9D0P8 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.15■□□□□ 0.66
Ift27Q9D0P8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ift27Q9D0P8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Ift27Q9D0P8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ift27Q9D0P8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ift27Q9D0P8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ift27Q9D0P8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ift27Q9D0P8 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.15■□□□□ 0.66
Ift27Q9D0P8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms