Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ssu72Q9CY97 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ssu72Q9CY97 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ssu72Q9CY97 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ssu72Q9CY97 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ssu72Q9CY97 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ssu72Q9CY97 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ssu72Q9CY97 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Ssu72Q9CY97 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ssu72Q9CY97 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ssu72Q9CY97 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ssu72Q9CY97 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Ssu72Q9CY97 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.07■□□□□ 0.96
Ssu72Q9CY97 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ssu72Q9CY97 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ssu72Q9CY97 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ssu72Q9CY97 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ssu72Q9CY97 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.06■□□□□ 0.96
Ssu72Q9CY97 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ssu72Q9CY97 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ssu72Q9CY97 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ssu72Q9CY97 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.06■□□□□ 0.96
Ssu72Q9CY97 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ssu72Q9CY97 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ssu72Q9CY97 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Ssu72Q9CY97 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ssu72Q9CY97 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ssu72Q9CY97 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.05■□□□□ 0.96
Ssu72Q9CY97 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ssu72Q9CY97 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ssu72Q9CY97 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ssu72Q9CY97 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.05■□□□□ 0.96
Ssu72Q9CY97 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.05■□□□□ 0.96
Ssu72Q9CY97 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ssu72Q9CY97 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ssu72Q9CY97 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ssu72Q9CY97 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssu72Q9CY97 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.04■□□□□ 0.96
Ssu72Q9CY97 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssu72Q9CY97 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ssu72Q9CY97 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssu72Q9CY97 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ssu72Q9CY97 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.04■□□□□ 0.96
Ssu72Q9CY97 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssu72Q9CY97 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssu72Q9CY97 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.03■□□□□ 0.96
Ssu72Q9CY97 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ssu72Q9CY97 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ssu72Q9CY97 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ssu72Q9CY97 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ssu72Q9CY97 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.02■□□□□ 0.96
Ssu72Q9CY97 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.02■□□□□ 0.96
Ssu72Q9CY97 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Ssu72Q9CY97 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ssu72Q9CY97 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Ssu72Q9CY97 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ssu72Q9CY97 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ssu72Q9CY97 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Ssu72Q9CY97 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ssu72Q9CY97 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ssu72Q9CY97 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Ssu72Q9CY97 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Ssu72Q9CY97 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ssu72Q9CY97 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Ssu72Q9CY97 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Ssu72Q9CY97 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21■□□□□ 0.95
Ssu72Q9CY97 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ssu72Q9CY97 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ssu72Q9CY97 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Ssu72Q9CY97 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ssu72Q9CY97 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ssu72Q9CY97 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssu72Q9CY97 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.99■□□□□ 0.95
Ssu72Q9CY97 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.99■□□□□ 0.95
Ssu72Q9CY97 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssu72Q9CY97 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ssu72Q9CY97 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ssu72Q9CY97 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ssu72Q9CY97 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssu72Q9CY97 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.98■□□□□ 0.95
Ssu72Q9CY97 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ssu72Q9CY97 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ssu72Q9CY97 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ssu72Q9CY97 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ssu72Q9CY97 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ssu72Q9CY97 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ssu72Q9CY97 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ssu72Q9CY97 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ssu72Q9CY97 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ssu72Q9CY97 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssu72Q9CY97 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ssu72Q9CY97 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssu72Q9CY97 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssu72Q9CY97 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssu72Q9CY97 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.97■□□□□ 0.95
Ssu72Q9CY97 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssu72Q9CY97 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.97■□□□□ 0.95
Ssu72Q9CY97 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssu72Q9CY97 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssu72Q9CY97 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms