Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Q9CR55 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Q9CR55 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q9CR55 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q9CR55 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.44■□□□□ 0.7
Q9CR55 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q9CR55 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q9CR55 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q9CR55 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q9CR55 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Q9CR55 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q9CR55 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Q9CR55 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q9CR55 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q9CR55 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q9CR55 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Q9CR55 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q9CR55 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Q9CR55 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Q9CR55 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q9CR55 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q9CR55 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.42■□□□□ 0.7
Q9CR55 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Q9CR55 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q9CR55 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Q9CR55 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q9CR55 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q9CR55 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q9CR55 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q9CR55 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q9CR55 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.41■□□□□ 0.7
Q9CR55 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Q9CR55 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Q9CR55 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q9CR55 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q9CR55 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Q9CR55 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q9CR55 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q9CR55 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q9CR55 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.39■□□□□ 0.69
Q9CR55 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q9CR55 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q9CR55 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.39■□□□□ 0.69
Q9CR55 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q9CR55 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q9CR55 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Q9CR55 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CR55 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CR55 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CR55 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Q9CR55 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CR55 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CR55 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Q9CR55 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CR55 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CR55 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q9CR55 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
Q9CR55 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Q9CR55 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q9CR55 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q9CR55 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q9CR55 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q9CR55 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
Q9CR55 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q9CR55 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Q9CR55 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Q9CR55 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.36■□□□□ 0.69
Q9CR55 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q9CR55 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q9CR55 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q9CR55 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q9CR55 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q9CR55 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q9CR55 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q9CR55 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Q9CR55 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q9CR55 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q9CR55 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Q9CR55 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q9CR55 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q9CR55 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q9CR55 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q9CR55 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q9CR55 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q9CR55 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.34■□□□□ 0.69
Q9CR55 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Q9CR55 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Q9CR55 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Q9CR55 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Q9CR55 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.69
Q9CR55 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Q9CR55 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
Q9CR55 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q9CR55 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q9CR55 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q9CR55 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9CR55 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9CR55 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9CR55 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.32■□□□□ 0.68
Q9CR55 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms