Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb1Q9CQ70 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
H2afb1Q9CQ70 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb1Q9CQ70 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb1Q9CQ70 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb1Q9CQ70 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb1Q9CQ70 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.3■□□□□ 0.36
H2afb1Q9CQ70 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb1Q9CQ70 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
H2afb1Q9CQ70 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb1Q9CQ70 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb1Q9CQ70 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb1Q9CQ70 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.29■□□□□ 0.36
H2afb1Q9CQ70 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb1Q9CQ70 Mir6538-201ENSMUST00000183713 110 ntBASIC17.29■□□□□ 0.36
H2afb1Q9CQ70 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.29■□□□□ 0.36
H2afb1Q9CQ70 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb1Q9CQ70 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb1Q9CQ70 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb1Q9CQ70 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
H2afb1Q9CQ70 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb1Q9CQ70 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.29■□□□□ 0.36
H2afb1Q9CQ70 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb1Q9CQ70 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb1Q9CQ70 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.28■□□□□ 0.36
H2afb1Q9CQ70 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb1Q9CQ70 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb1Q9CQ70 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.28■□□□□ 0.36
H2afb1Q9CQ70 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb1Q9CQ70 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb1Q9CQ70 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.28■□□□□ 0.36
H2afb1Q9CQ70 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
H2afb1Q9CQ70 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb1Q9CQ70 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb1Q9CQ70 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb1Q9CQ70 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb1Q9CQ70 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb1Q9CQ70 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
H2afb1Q9CQ70 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb1Q9CQ70 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb1Q9CQ70 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
H2afb1Q9CQ70 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
H2afb1Q9CQ70 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
H2afb1Q9CQ70 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
H2afb1Q9CQ70 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
H2afb1Q9CQ70 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
H2afb1Q9CQ70 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb1Q9CQ70 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
H2afb1Q9CQ70 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb1Q9CQ70 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb1Q9CQ70 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
H2afb1Q9CQ70 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb1Q9CQ70 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb1Q9CQ70 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
H2afb1Q9CQ70 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.25■□□□□ 0.35
H2afb1Q9CQ70 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb1Q9CQ70 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb1Q9CQ70 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
H2afb1Q9CQ70 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb1Q9CQ70 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.25■□□□□ 0.35
H2afb1Q9CQ70 Gm12366-201ENSMUST00000121722 873 ntBASIC17.25■□□□□ 0.35
H2afb1Q9CQ70 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.25■□□□□ 0.35
H2afb1Q9CQ70 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb1Q9CQ70 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.25■□□□□ 0.35
H2afb1Q9CQ70 Gm5786-201ENSMUST00000085368 882 ntBASIC17.25■□□□□ 0.35
H2afb1Q9CQ70 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
H2afb1Q9CQ70 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb1Q9CQ70 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb1Q9CQ70 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
H2afb1Q9CQ70 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb1Q9CQ70 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb1Q9CQ70 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
H2afb1Q9CQ70 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb1Q9CQ70 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.23■□□□□ 0.35
H2afb1Q9CQ70 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.23■□□□□ 0.35
H2afb1Q9CQ70 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.23■□□□□ 0.35
H2afb1Q9CQ70 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.23■□□□□ 0.35
H2afb1Q9CQ70 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb1Q9CQ70 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb1Q9CQ70 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb1Q9CQ70 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
H2afb1Q9CQ70 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
H2afb1Q9CQ70 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb1Q9CQ70 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb1Q9CQ70 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb1Q9CQ70 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb1Q9CQ70 Gm10420-201ENSMUST00000121713 882 ntBASIC17.22■□□□□ 0.35
H2afb1Q9CQ70 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb1Q9CQ70 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb1Q9CQ70 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb1Q9CQ70 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb1Q9CQ70 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb1Q9CQ70 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.22■□□□□ 0.35
H2afb1Q9CQ70 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb1Q9CQ70 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb1Q9CQ70 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb1Q9CQ70 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb1Q9CQ70 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
H2afb1Q9CQ70 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
H2afb1Q9CQ70 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms