Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nkd1Q99MH6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.88■□□□□ 0.77
Nkd1Q99MH6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkd1Q99MH6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Nkd1Q99MH6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nkd1Q99MH6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkd1Q99MH6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nkd1Q99MH6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nkd1Q99MH6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.88■□□□□ 0.77
Nkd1Q99MH6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nkd1Q99MH6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nkd1Q99MH6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkd1Q99MH6 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.87■□□□□ 0.77
Nkd1Q99MH6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkd1Q99MH6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Nkd1Q99MH6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nkd1Q99MH6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
Nkd1Q99MH6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkd1Q99MH6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkd1Q99MH6 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.86■□□□□ 0.77
Nkd1Q99MH6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkd1Q99MH6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkd1Q99MH6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nkd1Q99MH6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkd1Q99MH6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkd1Q99MH6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Nkd1Q99MH6 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.85■□□□□ 0.77
Nkd1Q99MH6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.85■□□□□ 0.77
Nkd1Q99MH6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkd1Q99MH6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Nkd1Q99MH6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkd1Q99MH6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Nkd1Q99MH6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.84■□□□□ 0.77
Nkd1Q99MH6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkd1Q99MH6 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.84■□□□□ 0.77
Nkd1Q99MH6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkd1Q99MH6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkd1Q99MH6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkd1Q99MH6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkd1Q99MH6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.83■□□□□ 0.77
Nkd1Q99MH6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkd1Q99MH6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nkd1Q99MH6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkd1Q99MH6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nkd1Q99MH6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nkd1Q99MH6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nkd1Q99MH6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nkd1Q99MH6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nkd1Q99MH6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkd1Q99MH6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkd1Q99MH6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Nkd1Q99MH6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.82■□□□□ 0.76
Nkd1Q99MH6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkd1Q99MH6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkd1Q99MH6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkd1Q99MH6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Nkd1Q99MH6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nkd1Q99MH6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.82■□□□□ 0.76
Nkd1Q99MH6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkd1Q99MH6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkd1Q99MH6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.81■□□□□ 0.76
Nkd1Q99MH6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Nkd1Q99MH6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Nkd1Q99MH6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nkd1Q99MH6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkd1Q99MH6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nkd1Q99MH6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.8■□□□□ 0.76
Nkd1Q99MH6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Nkd1Q99MH6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkd1Q99MH6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Nkd1Q99MH6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkd1Q99MH6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkd1Q99MH6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkd1Q99MH6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkd1Q99MH6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Nkd1Q99MH6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkd1Q99MH6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkd1Q99MH6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkd1Q99MH6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkd1Q99MH6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkd1Q99MH6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkd1Q99MH6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkd1Q99MH6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nkd1Q99MH6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.78■□□□□ 0.76
Nkd1Q99MH6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkd1Q99MH6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Nkd1Q99MH6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkd1Q99MH6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkd1Q99MH6 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkd1Q99MH6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nkd1Q99MH6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nkd1Q99MH6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkd1Q99MH6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkd1Q99MH6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkd1Q99MH6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkd1Q99MH6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkd1Q99MH6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkd1Q99MH6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkd1Q99MH6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nkd1Q99MH6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms