Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smarcd2Q99JR8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarcd2Q99JR8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smarcd2Q99JR8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smarcd2Q99JR8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smarcd2Q99JR8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smarcd2Q99JR8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.61■■□□□ 1.05
Smarcd2Q99JR8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smarcd2Q99JR8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smarcd2Q99JR8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smarcd2Q99JR8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarcd2Q99JR8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarcd2Q99JR8 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.6■■□□□ 1.05
Smarcd2Q99JR8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.6■■□□□ 1.05
Smarcd2Q99JR8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcd2Q99JR8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcd2Q99JR8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcd2Q99JR8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcd2Q99JR8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcd2Q99JR8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcd2Q99JR8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcd2Q99JR8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcd2Q99JR8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Smarcd2Q99JR8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smarcd2Q99JR8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.58■■□□□ 1.05
Smarcd2Q99JR8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smarcd2Q99JR8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smarcd2Q99JR8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Smarcd2Q99JR8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Smarcd2Q99JR8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Smarcd2Q99JR8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Smarcd2Q99JR8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smarcd2Q99JR8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smarcd2Q99JR8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.57■■□□□ 1.04
Smarcd2Q99JR8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Smarcd2Q99JR8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Smarcd2Q99JR8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Smarcd2Q99JR8 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.56■■□□□ 1.04
Smarcd2Q99JR8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smarcd2Q99JR8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.56■■□□□ 1.04
Smarcd2Q99JR8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smarcd2Q99JR8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smarcd2Q99JR8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Smarcd2Q99JR8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smarcd2Q99JR8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smarcd2Q99JR8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smarcd2Q99JR8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smarcd2Q99JR8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Smarcd2Q99JR8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.53■■□□□ 1.04
Smarcd2Q99JR8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smarcd2Q99JR8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smarcd2Q99JR8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smarcd2Q99JR8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.52■■□□□ 1.04
Smarcd2Q99JR8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.52■■□□□ 1.04
Smarcd2Q99JR8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smarcd2Q99JR8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smarcd2Q99JR8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Smarcd2Q99JR8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Smarcd2Q99JR8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Smarcd2Q99JR8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Smarcd2Q99JR8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
Smarcd2Q99JR8 Gm9870-201ENSMUST00000063874 645 ntBASIC21.51■■□□□ 1.03
Smarcd2Q99JR8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smarcd2Q99JR8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.51■■□□□ 1.03
Smarcd2Q99JR8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smarcd2Q99JR8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smarcd2Q99JR8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smarcd2Q99JR8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Smarcd2Q99JR8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smarcd2Q99JR8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smarcd2Q99JR8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smarcd2Q99JR8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smarcd2Q99JR8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Smarcd2Q99JR8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Smarcd2Q99JR8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smarcd2Q99JR8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
Smarcd2Q99JR8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smarcd2Q99JR8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarcd2Q99JR8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarcd2Q99JR8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarcd2Q99JR8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Smarcd2Q99JR8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.49■■□□□ 1.03
Smarcd2Q99JR8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.49■■□□□ 1.03
Smarcd2Q99JR8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarcd2Q99JR8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smarcd2Q99JR8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.48■■□□□ 1.03
Smarcd2Q99JR8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smarcd2Q99JR8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.48■■□□□ 1.03
Smarcd2Q99JR8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smarcd2Q99JR8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Smarcd2Q99JR8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smarcd2Q99JR8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smarcd2Q99JR8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smarcd2Q99JR8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Smarcd2Q99JR8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Smarcd2Q99JR8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smarcd2Q99JR8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.47■■□□□ 1.03
Smarcd2Q99JR8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Smarcd2Q99JR8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smarcd2Q99JR8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms