Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Rfc4Q99J62 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC24.58■■□□□ 1.53
Rfc4Q99J62 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
Rfc4Q99J62 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Rfc4Q99J62 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Rfc4Q99J62 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rfc4Q99J62 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rfc4Q99J62 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rfc4Q99J62 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Rfc4Q99J62 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
Rfc4Q99J62 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC24.57■■□□□ 1.52
Rfc4Q99J62 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rfc4Q99J62 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Rfc4Q99J62 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rfc4Q99J62 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rfc4Q99J62 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rfc4Q99J62 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.56■■□□□ 1.52
Rfc4Q99J62 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rfc4Q99J62 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rfc4Q99J62 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Rfc4Q99J62 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rfc4Q99J62 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rfc4Q99J62 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC24.55■■□□□ 1.52
Rfc4Q99J62 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Rfc4Q99J62 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Rfc4Q99J62 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC24.55■■□□□ 1.52
Rfc4Q99J62 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Rfc4Q99J62 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rfc4Q99J62 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rfc4Q99J62 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Rfc4Q99J62 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.54■■□□□ 1.52
Rfc4Q99J62 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rfc4Q99J62 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rfc4Q99J62 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Rfc4Q99J62 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rfc4Q99J62 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC24.53■■□□□ 1.52
Rfc4Q99J62 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC24.53■■□□□ 1.52
Rfc4Q99J62 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Rfc4Q99J62 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Rfc4Q99J62 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rfc4Q99J62 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rfc4Q99J62 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Rfc4Q99J62 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC24.52■■□□□ 1.52
Rfc4Q99J62 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rfc4Q99J62 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC24.52■■□□□ 1.52
Rfc4Q99J62 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rfc4Q99J62 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Rfc4Q99J62 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Rfc4Q99J62 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
Rfc4Q99J62 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
Rfc4Q99J62 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rfc4Q99J62 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC24.5■■□□□ 1.51
Rfc4Q99J62 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rfc4Q99J62 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rfc4Q99J62 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Rfc4Q99J62 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rfc4Q99J62 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rfc4Q99J62 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rfc4Q99J62 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Rfc4Q99J62 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rfc4Q99J62 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rfc4Q99J62 Gm9207-201ENSMUST00000198773 1115 ntBASIC24.48■■□□□ 1.51
Rfc4Q99J62 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Rfc4Q99J62 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rfc4Q99J62 Gm6934-201ENSMUST00000194780 1905 ntBASIC24.47■■□□□ 1.51
Rfc4Q99J62 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rfc4Q99J62 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.47■■□□□ 1.51
Rfc4Q99J62 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC24.47■■□□□ 1.51
Rfc4Q99J62 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC24.47■■□□□ 1.51
Rfc4Q99J62 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rfc4Q99J62 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Rfc4Q99J62 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rfc4Q99J62 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rfc4Q99J62 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Rfc4Q99J62 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rfc4Q99J62 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rfc4Q99J62 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rfc4Q99J62 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rfc4Q99J62 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC24.45■■□□□ 1.5
Rfc4Q99J62 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rfc4Q99J62 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Rfc4Q99J62 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC24.44■■□□□ 1.5
Rfc4Q99J62 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rfc4Q99J62 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rfc4Q99J62 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Rfc4Q99J62 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rfc4Q99J62 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rfc4Q99J62 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rfc4Q99J62 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Rfc4Q99J62 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rfc4Q99J62 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Rfc4Q99J62 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rfc4Q99J62 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC24.42■■□□□ 1.5
Rfc4Q99J62 Flvcr1-202ENSMUST00000191946 1216 ntBASIC24.42■■□□□ 1.5
Rfc4Q99J62 Gm5297-201ENSMUST00000198555 1171 ntBASIC24.42■■□□□ 1.5
Rfc4Q99J62 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rfc4Q99J62 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rfc4Q99J62 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Rfc4Q99J62 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rfc4Q99J62 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC24.41■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms