Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhac2Q91Y09 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhac2Q91Y09 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhac2Q91Y09 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Pcdhac2Q91Y09 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhac2Q91Y09 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Pcdhac2Q91Y09 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC23.26■■□□□ 1.31
Pcdhac2Q91Y09 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhac2Q91Y09 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC23.26■■□□□ 1.31
Pcdhac2Q91Y09 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhac2Q91Y09 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhac2Q91Y09 Gm12821-201ENSMUST00000120022 600 ntBASIC23.25■■□□□ 1.31
Pcdhac2Q91Y09 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC23.25■■□□□ 1.31
Pcdhac2Q91Y09 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhac2Q91Y09 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhac2Q91Y09 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.24■■□□□ 1.31
Pcdhac2Q91Y09 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC23.24■■□□□ 1.31
Pcdhac2Q91Y09 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Pcdhac2Q91Y09 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhac2Q91Y09 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhac2Q91Y09 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.24■■□□□ 1.31
Pcdhac2Q91Y09 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.23■■□□□ 1.31
Pcdhac2Q91Y09 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhac2Q91Y09 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhac2Q91Y09 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhac2Q91Y09 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhac2Q91Y09 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhac2Q91Y09 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhac2Q91Y09 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhac2Q91Y09 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhac2Q91Y09 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhac2Q91Y09 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhac2Q91Y09 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Pcdhac2Q91Y09 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhac2Q91Y09 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Pcdhac2Q91Y09 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhac2Q91Y09 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC23.21■■□□□ 1.31
Pcdhac2Q91Y09 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Pcdhac2Q91Y09 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhac2Q91Y09 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Pcdhac2Q91Y09 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhac2Q91Y09 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC23.2■■□□□ 1.3
Pcdhac2Q91Y09 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhac2Q91Y09 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhac2Q91Y09 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhac2Q91Y09 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhac2Q91Y09 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhac2Q91Y09 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhac2Q91Y09 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhac2Q91Y09 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhac2Q91Y09 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhac2Q91Y09 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Pcdhac2Q91Y09 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhac2Q91Y09 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhac2Q91Y09 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhac2Q91Y09 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhac2Q91Y09 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC23.18■■□□□ 1.3
Pcdhac2Q91Y09 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhac2Q91Y09 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC23.18■■□□□ 1.3
Pcdhac2Q91Y09 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC23.18■■□□□ 1.3
Pcdhac2Q91Y09 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.18■■□□□ 1.3
Pcdhac2Q91Y09 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhac2Q91Y09 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhac2Q91Y09 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhac2Q91Y09 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhac2Q91Y09 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhac2Q91Y09 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhac2Q91Y09 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhac2Q91Y09 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhac2Q91Y09 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Pcdhac2Q91Y09 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhac2Q91Y09 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhac2Q91Y09 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhac2Q91Y09 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC23.16■■□□□ 1.3
Pcdhac2Q91Y09 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhac2Q91Y09 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhac2Q91Y09 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhac2Q91Y09 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhac2Q91Y09 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.15■■□□□ 1.3
Pcdhac2Q91Y09 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Pcdhac2Q91Y09 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Pcdhac2Q91Y09 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC23.15■■□□□ 1.3
Pcdhac2Q91Y09 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC23.15■■□□□ 1.3
Pcdhac2Q91Y09 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhac2Q91Y09 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhac2Q91Y09 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhac2Q91Y09 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Pcdhac2Q91Y09 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhac2Q91Y09 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdhac2Q91Y09 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdhac2Q91Y09 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Pcdhac2Q91Y09 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.14■■□□□ 1.29
Pcdhac2Q91Y09 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhac2Q91Y09 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhac2Q91Y09 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhac2Q91Y09 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhac2Q91Y09 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhac2Q91Y09 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhac2Q91Y09 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhac2Q91Y09 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms