Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.09■■□□□ 1.13
Pcdhb1Q91Y08 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.09■■□□□ 1.13
Pcdhb1Q91Y08 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb1Q91Y08 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhb1Q91Y08 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhb1Q91Y08 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
Pcdhb1Q91Y08 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Pcdhb1Q91Y08 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.12
Pcdhb1Q91Y08 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb1Q91Y08 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb1Q91Y08 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb1Q91Y08 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb1Q91Y08 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Pcdhb1Q91Y08 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Pcdhb1Q91Y08 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.06■■□□□ 1.12
Pcdhb1Q91Y08 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhb1Q91Y08 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhb1Q91Y08 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Pcdhb1Q91Y08 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb1Q91Y08 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.05■■□□□ 1.12
Pcdhb1Q91Y08 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb1Q91Y08 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.05■■□□□ 1.12
Pcdhb1Q91Y08 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb1Q91Y08 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC22.04■■□□□ 1.12
Pcdhb1Q91Y08 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb1Q91Y08 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Pcdhb1Q91Y08 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.04■■□□□ 1.12
Pcdhb1Q91Y08 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.04■■□□□ 1.12
Pcdhb1Q91Y08 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb1Q91Y08 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
Pcdhb1Q91Y08 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb1Q91Y08 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb1Q91Y08 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb1Q91Y08 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Pcdhb1Q91Y08 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb1Q91Y08 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb1Q91Y08 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb1Q91Y08 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb1Q91Y08 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb1Q91Y08 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.03■■□□□ 1.12
Pcdhb1Q91Y08 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb1Q91Y08 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb1Q91Y08 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb1Q91Y08 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb1Q91Y08 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb1Q91Y08 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.02■■□□□ 1.12
Pcdhb1Q91Y08 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb1Q91Y08 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb1Q91Y08 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Pcdhb1Q91Y08 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.01■■□□□ 1.11
Pcdhb1Q91Y08 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb1Q91Y08 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.01■■□□□ 1.11
Pcdhb1Q91Y08 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.01■■□□□ 1.11
Pcdhb1Q91Y08 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Pcdhb1Q91Y08 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.01■■□□□ 1.11
Pcdhb1Q91Y08 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb1Q91Y08 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb1Q91Y08 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb1Q91Y08 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb1Q91Y08 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb1Q91Y08 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb1Q91Y08 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb1Q91Y08 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb1Q91Y08 Gm45444-201ENSMUST00000211394 898 ntBASIC22■■□□□ 1.11
Pcdhb1Q91Y08 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Pcdhb1Q91Y08 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb1Q91Y08 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb1Q91Y08 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb1Q91Y08 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.99■■□□□ 1.11
Pcdhb1Q91Y08 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb1Q91Y08 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb1Q91Y08 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.99■■□□□ 1.11
Pcdhb1Q91Y08 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.99■■□□□ 1.11
Pcdhb1Q91Y08 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb1Q91Y08 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.99■■□□□ 1.11
Pcdhb1Q91Y08 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb1Q91Y08 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.99■■□□□ 1.11
Pcdhb1Q91Y08 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb1Q91Y08 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb1Q91Y08 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.98■■□□□ 1.11
Pcdhb1Q91Y08 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb1Q91Y08 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb1Q91Y08 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Pcdhb1Q91Y08 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb1Q91Y08 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb1Q91Y08 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb1Q91Y08 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Pcdhb1Q91Y08 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Pcdhb1Q91Y08 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb1Q91Y08 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb1Q91Y08 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Pcdhb1Q91Y08 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.97■■□□□ 1.11
Pcdhb1Q91Y08 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb1Q91Y08 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.97■■□□□ 1.11
Pcdhb1Q91Y08 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb1Q91Y08 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
Pcdhb1Q91Y08 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb1Q91Y08 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb1Q91Y08 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb1Q91Y08 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.96■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms