Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb3Q91XZ7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb3Q91XZ7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb3Q91XZ7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pcdhb3Q91XZ7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb3Q91XZ7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb3Q91XZ7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb3Q91XZ7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb3Q91XZ7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb3Q91XZ7 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Pcdhb3Q91XZ7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb3Q91XZ7 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Pcdhb3Q91XZ7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb3Q91XZ7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb3Q91XZ7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb3Q91XZ7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb3Q91XZ7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb3Q91XZ7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb3Q91XZ7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.91■□□□□ 0.94
Pcdhb3Q91XZ7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb3Q91XZ7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Pcdhb3Q91XZ7 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb3Q91XZ7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.9■□□□□ 0.94
Pcdhb3Q91XZ7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb3Q91XZ7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb3Q91XZ7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb3Q91XZ7 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.89■□□□□ 0.94
Pcdhb3Q91XZ7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Pcdhb3Q91XZ7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb3Q91XZ7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb3Q91XZ7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb3Q91XZ7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Pcdhb3Q91XZ7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb3Q91XZ7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb3Q91XZ7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb3Q91XZ7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb3Q91XZ7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.88■□□□□ 0.93
Pcdhb3Q91XZ7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb3Q91XZ7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb3Q91XZ7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.88■□□□□ 0.93
Pcdhb3Q91XZ7 Gm12366-201ENSMUST00000121722 873 ntBASIC20.88■□□□□ 0.93
Pcdhb3Q91XZ7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.88■□□□□ 0.93
Pcdhb3Q91XZ7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb3Q91XZ7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.88■□□□□ 0.93
Pcdhb3Q91XZ7 Gm5786-201ENSMUST00000085368 882 ntBASIC20.88■□□□□ 0.93
Pcdhb3Q91XZ7 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb3Q91XZ7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb3Q91XZ7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb3Q91XZ7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb3Q91XZ7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb3Q91XZ7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb3Q91XZ7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb3Q91XZ7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb3Q91XZ7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.87■□□□□ 0.93
Pcdhb3Q91XZ7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb3Q91XZ7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb3Q91XZ7 Terc-201ENSMUST00000082862 423 ntBASIC20.87■□□□□ 0.93
Pcdhb3Q91XZ7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb3Q91XZ7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb3Q91XZ7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb3Q91XZ7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb3Q91XZ7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb3Q91XZ7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb3Q91XZ7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb3Q91XZ7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb3Q91XZ7 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Pcdhb3Q91XZ7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb3Q91XZ7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb3Q91XZ7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb3Q91XZ7 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb3Q91XZ7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb3Q91XZ7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb3Q91XZ7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb3Q91XZ7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb3Q91XZ7 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb3Q91XZ7 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Pcdhb3Q91XZ7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb3Q91XZ7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb3Q91XZ7 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb3Q91XZ7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb3Q91XZ7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb3Q91XZ7 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb3Q91XZ7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.84■□□□□ 0.93
Pcdhb3Q91XZ7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb3Q91XZ7 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb3Q91XZ7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb3Q91XZ7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb3Q91XZ7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.83■□□□□ 0.93
Pcdhb3Q91XZ7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb3Q91XZ7 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb3Q91XZ7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb3Q91XZ7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb3Q91XZ7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb3Q91XZ7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhb3Q91XZ7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb3Q91XZ7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb3Q91XZ7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb3Q91XZ7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb3Q91XZ7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb3Q91XZ7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms