Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Vsx1Q91V10 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Vsx1Q91V10 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.01■□□□□ 0.95
Vsx1Q91V10 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vsx1Q91V10 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21■□□□□ 0.95
Vsx1Q91V10 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21■□□□□ 0.95
Vsx1Q91V10 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
Vsx1Q91V10 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vsx1Q91V10 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vsx1Q91V10 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vsx1Q91V10 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vsx1Q91V10 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vsx1Q91V10 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vsx1Q91V10 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.99■□□□□ 0.95
Vsx1Q91V10 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vsx1Q91V10 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Vsx1Q91V10 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Vsx1Q91V10 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Vsx1Q91V10 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vsx1Q91V10 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.99■□□□□ 0.95
Vsx1Q91V10 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vsx1Q91V10 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Vsx1Q91V10 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vsx1Q91V10 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Vsx1Q91V10 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vsx1Q91V10 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.97■□□□□ 0.95
Vsx1Q91V10 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vsx1Q91V10 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vsx1Q91V10 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vsx1Q91V10 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.97■□□□□ 0.95
Vsx1Q91V10 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vsx1Q91V10 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.96■□□□□ 0.95
Vsx1Q91V10 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Vsx1Q91V10 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vsx1Q91V10 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vsx1Q91V10 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vsx1Q91V10 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.95■□□□□ 0.94
Vsx1Q91V10 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.95■□□□□ 0.94
Vsx1Q91V10 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.95■□□□□ 0.94
Vsx1Q91V10 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vsx1Q91V10 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.94■□□□□ 0.94
Vsx1Q91V10 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vsx1Q91V10 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vsx1Q91V10 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Vsx1Q91V10 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vsx1Q91V10 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
Vsx1Q91V10 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Vsx1Q91V10 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Vsx1Q91V10 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.93■□□□□ 0.94
Vsx1Q91V10 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Vsx1Q91V10 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.93■□□□□ 0.94
Vsx1Q91V10 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.93■□□□□ 0.94
Vsx1Q91V10 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vsx1Q91V10 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vsx1Q91V10 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vsx1Q91V10 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vsx1Q91V10 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Vsx1Q91V10 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Vsx1Q91V10 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vsx1Q91V10 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.92■□□□□ 0.94
Vsx1Q91V10 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Vsx1Q91V10 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Vsx1Q91V10 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.92■□□□□ 0.94
Vsx1Q91V10 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.92■□□□□ 0.94
Vsx1Q91V10 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vsx1Q91V10 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vsx1Q91V10 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Vsx1Q91V10 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vsx1Q91V10 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Vsx1Q91V10 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Vsx1Q91V10 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vsx1Q91V10 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.91■□□□□ 0.94
Vsx1Q91V10 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vsx1Q91V10 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vsx1Q91V10 Gm6139-201ENSMUST00000079261 882 ntBASIC20.91■□□□□ 0.94
Vsx1Q91V10 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Vsx1Q91V10 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Vsx1Q91V10 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vsx1Q91V10 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Vsx1Q91V10 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Vsx1Q91V10 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Vsx1Q91V10 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Vsx1Q91V10 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vsx1Q91V10 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vsx1Q91V10 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Vsx1Q91V10 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.89■□□□□ 0.93
Vsx1Q91V10 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.89■□□□□ 0.93
Vsx1Q91V10 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Vsx1Q91V10 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
Vsx1Q91V10 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vsx1Q91V10 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Vsx1Q91V10 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vsx1Q91V10 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.88■□□□□ 0.93
Vsx1Q91V10 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Vsx1Q91V10 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vsx1Q91V10 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Vsx1Q91V10 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vsx1Q91V10 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vsx1Q91V10 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Vsx1Q91V10 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms