Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tram1Q91V04 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.15■□□□□ 0.5
Tram1Q91V04 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Tram1Q91V04 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.15■□□□□ 0.5
Tram1Q91V04 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Tram1Q91V04 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.14■□□□□ 0.49
Tram1Q91V04 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tram1Q91V04 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tram1Q91V04 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tram1Q91V04 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tram1Q91V04 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tram1Q91V04 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.14■□□□□ 0.49
Tram1Q91V04 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tram1Q91V04 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tram1Q91V04 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tram1Q91V04 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tram1Q91V04 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tram1Q91V04 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Tram1Q91V04 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tram1Q91V04 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tram1Q91V04 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tram1Q91V04 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.13■□□□□ 0.49
Tram1Q91V04 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Tram1Q91V04 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tram1Q91V04 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tram1Q91V04 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Tram1Q91V04 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tram1Q91V04 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tram1Q91V04 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tram1Q91V04 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tram1Q91V04 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tram1Q91V04 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tram1Q91V04 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Tram1Q91V04 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.12■□□□□ 0.49
Tram1Q91V04 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tram1Q91V04 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tram1Q91V04 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tram1Q91V04 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tram1Q91V04 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tram1Q91V04 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tram1Q91V04 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tram1Q91V04 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tram1Q91V04 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tram1Q91V04 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Tram1Q91V04 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tram1Q91V04 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tram1Q91V04 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tram1Q91V04 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Tram1Q91V04 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tram1Q91V04 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tram1Q91V04 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.1■□□□□ 0.49
Tram1Q91V04 Mir3960-201ENSMUST00000198213 73 ntBASIC18.1■□□□□ 0.49
Tram1Q91V04 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Tram1Q91V04 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tram1Q91V04 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tram1Q91V04 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tram1Q91V04 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tram1Q91V04 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tram1Q91V04 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tram1Q91V04 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tram1Q91V04 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tram1Q91V04 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Tram1Q91V04 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.09■□□□□ 0.49
Tram1Q91V04 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tram1Q91V04 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.09■□□□□ 0.49
Tram1Q91V04 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tram1Q91V04 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.08■□□□□ 0.49
Tram1Q91V04 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tram1Q91V04 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tram1Q91V04 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tram1Q91V04 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Tram1Q91V04 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tram1Q91V04 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tram1Q91V04 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tram1Q91V04 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tram1Q91V04 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Tram1Q91V04 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tram1Q91V04 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
Tram1Q91V04 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tram1Q91V04 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Tram1Q91V04 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tram1Q91V04 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.06■□□□□ 0.48
Tram1Q91V04 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tram1Q91V04 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tram1Q91V04 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Tram1Q91V04 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tram1Q91V04 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tram1Q91V04 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tram1Q91V04 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tram1Q91V04 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tram1Q91V04 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.05■□□□□ 0.48
Tram1Q91V04 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tram1Q91V04 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tram1Q91V04 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tram1Q91V04 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Tram1Q91V04 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tram1Q91V04 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Tram1Q91V04 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tram1Q91V04 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tram1Q91V04 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms