Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh18Q8VHR0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh18Q8VHR0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh18Q8VHR0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.23■□□□□ 0.83
Pcdh18Q8VHR0 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.23■□□□□ 0.83
Pcdh18Q8VHR0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh18Q8VHR0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Pcdh18Q8VHR0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh18Q8VHR0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh18Q8VHR0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh18Q8VHR0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
Pcdh18Q8VHR0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcdh18Q8VHR0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh18Q8VHR0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh18Q8VHR0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh18Q8VHR0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcdh18Q8VHR0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh18Q8VHR0 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.22■□□□□ 0.83
Pcdh18Q8VHR0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh18Q8VHR0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.22■□□□□ 0.83
Pcdh18Q8VHR0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh18Q8VHR0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcdh18Q8VHR0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh18Q8VHR0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh18Q8VHR0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh18Q8VHR0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Pcdh18Q8VHR0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh18Q8VHR0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh18Q8VHR0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh18Q8VHR0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pcdh18Q8VHR0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pcdh18Q8VHR0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
Pcdh18Q8VHR0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh18Q8VHR0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh18Q8VHR0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.2■□□□□ 0.82
Pcdh18Q8VHR0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.2■□□□□ 0.82
Pcdh18Q8VHR0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh18Q8VHR0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pcdh18Q8VHR0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh18Q8VHR0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh18Q8VHR0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh18Q8VHR0 Golph3-202ENSMUST00000226517 2359 ntBASIC20.19■□□□□ 0.82
Pcdh18Q8VHR0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.19■□□□□ 0.82
Pcdh18Q8VHR0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh18Q8VHR0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh18Q8VHR0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Pcdh18Q8VHR0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh18Q8VHR0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh18Q8VHR0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh18Q8VHR0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pcdh18Q8VHR0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh18Q8VHR0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh18Q8VHR0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh18Q8VHR0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh18Q8VHR0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh18Q8VHR0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
Pcdh18Q8VHR0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh18Q8VHR0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh18Q8VHR0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdh18Q8VHR0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pcdh18Q8VHR0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh18Q8VHR0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.16■□□□□ 0.82
Pcdh18Q8VHR0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh18Q8VHR0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh18Q8VHR0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh18Q8VHR0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdh18Q8VHR0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh18Q8VHR0 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.15■□□□□ 0.82
Pcdh18Q8VHR0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Pcdh18Q8VHR0 Scarna2-201ENSMUST00000157560 414 ntBASIC20.15■□□□□ 0.82
Pcdh18Q8VHR0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh18Q8VHR0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Pcdh18Q8VHR0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdh18Q8VHR0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh18Q8VHR0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh18Q8VHR0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh18Q8VHR0 Gm9806-201ENSMUST00000051080 552 ntBASIC20.14■□□□□ 0.81
Pcdh18Q8VHR0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh18Q8VHR0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh18Q8VHR0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh18Q8VHR0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh18Q8VHR0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh18Q8VHR0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh18Q8VHR0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.13■□□□□ 0.81
Pcdh18Q8VHR0 Gm44428-201ENSMUST00000204474 874 ntBASIC20.13■□□□□ 0.81
Pcdh18Q8VHR0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Pcdh18Q8VHR0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh18Q8VHR0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh18Q8VHR0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh18Q8VHR0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh18Q8VHR0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh18Q8VHR0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh18Q8VHR0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh18Q8VHR0 Gm16437-201ENSMUST00000025669 507 ntBASIC20.12■□□□□ 0.81
Pcdh18Q8VHR0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Pcdh18Q8VHR0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh18Q8VHR0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh18Q8VHR0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Pcdh18Q8VHR0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh18Q8VHR0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms