Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Retreg1dQ8VE91 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retreg1dQ8VE91 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retreg1dQ8VE91 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retreg1dQ8VE91 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.86■□□□□ 0.93
Retreg1dQ8VE91 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retreg1dQ8VE91 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retreg1dQ8VE91 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retreg1dQ8VE91 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retreg1dQ8VE91 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retreg1dQ8VE91 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Retreg1dQ8VE91 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retreg1dQ8VE91 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retreg1dQ8VE91 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retreg1dQ8VE91 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retreg1dQ8VE91 Etf1-202ENSMUST00000180351 108 ntBASIC20.84■□□□□ 0.93
Retreg1dQ8VE91 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retreg1dQ8VE91 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retreg1dQ8VE91 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.83■□□□□ 0.93
Retreg1dQ8VE91 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.83■□□□□ 0.93
Retreg1dQ8VE91 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retreg1dQ8VE91 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retreg1dQ8VE91 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retreg1dQ8VE91 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.82■□□□□ 0.92
Retreg1dQ8VE91 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.82■□□□□ 0.92
Retreg1dQ8VE91 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.82■□□□□ 0.92
Retreg1dQ8VE91 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.82■□□□□ 0.92
Retreg1dQ8VE91 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.82■□□□□ 0.92
Retreg1dQ8VE91 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Retreg1dQ8VE91 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retreg1dQ8VE91 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
Retreg1dQ8VE91 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retreg1dQ8VE91 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retreg1dQ8VE91 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retreg1dQ8VE91 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retreg1dQ8VE91 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Retreg1dQ8VE91 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retreg1dQ8VE91 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retreg1dQ8VE91 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retreg1dQ8VE91 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retreg1dQ8VE91 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retreg1dQ8VE91 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retreg1dQ8VE91 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Retreg1dQ8VE91 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.81■□□□□ 0.92
Retreg1dQ8VE91 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Retreg1dQ8VE91 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retreg1dQ8VE91 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retreg1dQ8VE91 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retreg1dQ8VE91 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Retreg1dQ8VE91 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Retreg1dQ8VE91 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retreg1dQ8VE91 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retreg1dQ8VE91 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retreg1dQ8VE91 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retreg1dQ8VE91 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Retreg1dQ8VE91 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retreg1dQ8VE91 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retreg1dQ8VE91 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.79■□□□□ 0.92
Retreg1dQ8VE91 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg1dQ8VE91 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg1dQ8VE91 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg1dQ8VE91 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg1dQ8VE91 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg1dQ8VE91 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg1dQ8VE91 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg1dQ8VE91 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg1dQ8VE91 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retreg1dQ8VE91 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retreg1dQ8VE91 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.77■□□□□ 0.92
Retreg1dQ8VE91 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.77■□□□□ 0.92
Retreg1dQ8VE91 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Retreg1dQ8VE91 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retreg1dQ8VE91 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg1dQ8VE91 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg1dQ8VE91 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg1dQ8VE91 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg1dQ8VE91 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.76■□□□□ 0.91
Retreg1dQ8VE91 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.76■□□□□ 0.91
Retreg1dQ8VE91 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg1dQ8VE91 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg1dQ8VE91 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg1dQ8VE91 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.76■□□□□ 0.91
Retreg1dQ8VE91 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg1dQ8VE91 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retreg1dQ8VE91 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.75■□□□□ 0.91
Retreg1dQ8VE91 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retreg1dQ8VE91 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.75■□□□□ 0.91
Retreg1dQ8VE91 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Retreg1dQ8VE91 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Retreg1dQ8VE91 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retreg1dQ8VE91 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retreg1dQ8VE91 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retreg1dQ8VE91 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retreg1dQ8VE91 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Retreg1dQ8VE91 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.74■□□□□ 0.91
Retreg1dQ8VE91 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retreg1dQ8VE91 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retreg1dQ8VE91 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retreg1dQ8VE91 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Retreg1dQ8VE91 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms