Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
Rprd1aQ8VDS4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Rprd1aQ8VDS4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rprd1aQ8VDS4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rprd1aQ8VDS4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rprd1aQ8VDS4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rprd1aQ8VDS4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Rprd1aQ8VDS4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rprd1aQ8VDS4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rprd1aQ8VDS4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rprd1aQ8VDS4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rprd1aQ8VDS4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rprd1aQ8VDS4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rprd1aQ8VDS4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
Rprd1aQ8VDS4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rprd1aQ8VDS4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rprd1aQ8VDS4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
Rprd1aQ8VDS4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.74■■□□□ 1.07
Rprd1aQ8VDS4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rprd1aQ8VDS4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rprd1aQ8VDS4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rprd1aQ8VDS4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rprd1aQ8VDS4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rprd1aQ8VDS4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rprd1aQ8VDS4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rprd1aQ8VDS4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rprd1aQ8VDS4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rprd1aQ8VDS4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rprd1aQ8VDS4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rprd1aQ8VDS4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rprd1aQ8VDS4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rprd1aQ8VDS4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rprd1aQ8VDS4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rprd1aQ8VDS4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rprd1aQ8VDS4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Rprd1aQ8VDS4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rprd1aQ8VDS4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rprd1aQ8VDS4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rprd1aQ8VDS4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rprd1aQ8VDS4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rprd1aQ8VDS4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rprd1aQ8VDS4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rprd1aQ8VDS4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Rprd1aQ8VDS4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.71■■□□□ 1.07
Rprd1aQ8VDS4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.71■■□□□ 1.07
Rprd1aQ8VDS4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.71■■□□□ 1.07
Rprd1aQ8VDS4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.71■■□□□ 1.07
Rprd1aQ8VDS4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rprd1aQ8VDS4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rprd1aQ8VDS4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rprd1aQ8VDS4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.7■■□□□ 1.06
Rprd1aQ8VDS4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rprd1aQ8VDS4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rprd1aQ8VDS4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.69■■□□□ 1.06
Rprd1aQ8VDS4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rprd1aQ8VDS4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rprd1aQ8VDS4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rprd1aQ8VDS4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rprd1aQ8VDS4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rprd1aQ8VDS4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rprd1aQ8VDS4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rprd1aQ8VDS4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rprd1aQ8VDS4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rprd1aQ8VDS4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rprd1aQ8VDS4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rprd1aQ8VDS4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Rprd1aQ8VDS4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Rprd1aQ8VDS4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rprd1aQ8VDS4 Rps24-207ENSMUST00000224568 714 ntBASIC21.68■■□□□ 1.06
Rprd1aQ8VDS4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Rprd1aQ8VDS4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rprd1aQ8VDS4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.68■■□□□ 1.06
Rprd1aQ8VDS4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.68■■□□□ 1.06
Rprd1aQ8VDS4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Rprd1aQ8VDS4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Rprd1aQ8VDS4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rprd1aQ8VDS4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rprd1aQ8VDS4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.67■■□□□ 1.06
Rprd1aQ8VDS4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.67■■□□□ 1.06
Rprd1aQ8VDS4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.67■■□□□ 1.06
Rprd1aQ8VDS4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rprd1aQ8VDS4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Rprd1aQ8VDS4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rprd1aQ8VDS4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.66■■□□□ 1.06
Rprd1aQ8VDS4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.66■■□□□ 1.06
Rprd1aQ8VDS4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rprd1aQ8VDS4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rprd1aQ8VDS4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.65■■□□□ 1.06
Rprd1aQ8VDS4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Rprd1aQ8VDS4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rprd1aQ8VDS4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.65■■□□□ 1.06
Rprd1aQ8VDS4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rprd1aQ8VDS4 Gm9959-201ENSMUST00000068277 390 ntBASIC21.65■■□□□ 1.06
Rprd1aQ8VDS4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Rprd1aQ8VDS4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Rprd1aQ8VDS4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rprd1aQ8VDS4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rprd1aQ8VDS4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rprd1aQ8VDS4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rprd1aQ8VDS4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms