Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ndc1Q8VCB1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ndc1Q8VCB1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.94■□□□□ 0.78
Ndc1Q8VCB1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.94■□□□□ 0.78
Ndc1Q8VCB1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ndc1Q8VCB1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ndc1Q8VCB1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ndc1Q8VCB1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.94■□□□□ 0.78
Ndc1Q8VCB1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ndc1Q8VCB1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ndc1Q8VCB1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ndc1Q8VCB1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.93■□□□□ 0.78
Ndc1Q8VCB1 Gm7417-201ENSMUST00000192950 473 ntBASIC19.93■□□□□ 0.78
Ndc1Q8VCB1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.93■□□□□ 0.78
Ndc1Q8VCB1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ndc1Q8VCB1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ndc1Q8VCB1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ndc1Q8VCB1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ndc1Q8VCB1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ndc1Q8VCB1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ndc1Q8VCB1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ndc1Q8VCB1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ndc1Q8VCB1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ndc1Q8VCB1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ndc1Q8VCB1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ndc1Q8VCB1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ndc1Q8VCB1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ndc1Q8VCB1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ndc1Q8VCB1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.91■□□□□ 0.78
Ndc1Q8VCB1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.91■□□□□ 0.78
Ndc1Q8VCB1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.91■□□□□ 0.78
Ndc1Q8VCB1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ndc1Q8VCB1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ndc1Q8VCB1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ndc1Q8VCB1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ndc1Q8VCB1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ndc1Q8VCB1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ndc1Q8VCB1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ndc1Q8VCB1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.9■□□□□ 0.78
Ndc1Q8VCB1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ndc1Q8VCB1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ndc1Q8VCB1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ndc1Q8VCB1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.9■□□□□ 0.78
Ndc1Q8VCB1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ndc1Q8VCB1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ndc1Q8VCB1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ndc1Q8VCB1 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.9■□□□□ 0.78
Ndc1Q8VCB1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.89■□□□□ 0.78
Ndc1Q8VCB1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ndc1Q8VCB1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.89■□□□□ 0.77
Ndc1Q8VCB1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.89■□□□□ 0.77
Ndc1Q8VCB1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ndc1Q8VCB1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ndc1Q8VCB1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ndc1Q8VCB1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Ndc1Q8VCB1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ndc1Q8VCB1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ndc1Q8VCB1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ndc1Q8VCB1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ndc1Q8VCB1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ndc1Q8VCB1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ndc1Q8VCB1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ndc1Q8VCB1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.88■□□□□ 0.77
Ndc1Q8VCB1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.88■□□□□ 0.77
Ndc1Q8VCB1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ndc1Q8VCB1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ndc1Q8VCB1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ndc1Q8VCB1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.88■□□□□ 0.77
Ndc1Q8VCB1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ndc1Q8VCB1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ndc1Q8VCB1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Ndc1Q8VCB1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.87■□□□□ 0.77
Ndc1Q8VCB1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ndc1Q8VCB1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ndc1Q8VCB1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Ndc1Q8VCB1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ndc1Q8VCB1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ndc1Q8VCB1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ndc1Q8VCB1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.86■□□□□ 0.77
Ndc1Q8VCB1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.86■□□□□ 0.77
Ndc1Q8VCB1 Gm40881-201ENSMUST00000223397 166 ntBASIC19.86■□□□□ 0.77
Ndc1Q8VCB1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.86■□□□□ 0.77
Ndc1Q8VCB1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ndc1Q8VCB1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ndc1Q8VCB1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ndc1Q8VCB1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
Ndc1Q8VCB1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ndc1Q8VCB1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ndc1Q8VCB1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ndc1Q8VCB1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ndc1Q8VCB1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.85■□□□□ 0.77
Ndc1Q8VCB1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ndc1Q8VCB1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.85■□□□□ 0.77
Ndc1Q8VCB1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ndc1Q8VCB1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.85■□□□□ 0.77
Ndc1Q8VCB1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ndc1Q8VCB1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ndc1Q8VCB1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.84■□□□□ 0.77
Ndc1Q8VCB1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ndc1Q8VCB1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms