Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf8Q8VC56 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.25■□□□□ 0.83
Rnf8Q8VC56 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf8Q8VC56 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf8Q8VC56 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Rnf8Q8VC56 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf8Q8VC56 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Rnf8Q8VC56 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf8Q8VC56 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rnf8Q8VC56 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rnf8Q8VC56 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Rnf8Q8VC56 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf8Q8VC56 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf8Q8VC56 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf8Q8VC56 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf8Q8VC56 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf8Q8VC56 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
Rnf8Q8VC56 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf8Q8VC56 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Rnf8Q8VC56 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf8Q8VC56 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf8Q8VC56 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf8Q8VC56 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf8Q8VC56 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Rnf8Q8VC56 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf8Q8VC56 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rnf8Q8VC56 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf8Q8VC56 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.21■□□□□ 0.83
Rnf8Q8VC56 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf8Q8VC56 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf8Q8VC56 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rnf8Q8VC56 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf8Q8VC56 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.21■□□□□ 0.83
Rnf8Q8VC56 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf8Q8VC56 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.21■□□□□ 0.83
Rnf8Q8VC56 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf8Q8VC56 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rnf8Q8VC56 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf8Q8VC56 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf8Q8VC56 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rnf8Q8VC56 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf8Q8VC56 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf8Q8VC56 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf8Q8VC56 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf8Q8VC56 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rnf8Q8VC56 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf8Q8VC56 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Rnf8Q8VC56 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf8Q8VC56 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf8Q8VC56 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf8Q8VC56 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf8Q8VC56 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf8Q8VC56 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf8Q8VC56 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf8Q8VC56 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.18■□□□□ 0.82
Rnf8Q8VC56 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.18■□□□□ 0.82
Rnf8Q8VC56 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf8Q8VC56 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf8Q8VC56 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.17■□□□□ 0.82
Rnf8Q8VC56 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf8Q8VC56 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf8Q8VC56 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf8Q8VC56 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf8Q8VC56 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf8Q8VC56 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
Rnf8Q8VC56 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf8Q8VC56 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf8Q8VC56 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf8Q8VC56 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf8Q8VC56 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf8Q8VC56 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf8Q8VC56 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf8Q8VC56 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.15■□□□□ 0.82
Rnf8Q8VC56 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.15■□□□□ 0.82
Rnf8Q8VC56 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Rnf8Q8VC56 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf8Q8VC56 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf8Q8VC56 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rnf8Q8VC56 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf8Q8VC56 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf8Q8VC56 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.14■□□□□ 0.81
Rnf8Q8VC56 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.14■□□□□ 0.81
Rnf8Q8VC56 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.14■□□□□ 0.81
Rnf8Q8VC56 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf8Q8VC56 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Rnf8Q8VC56 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf8Q8VC56 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Rnf8Q8VC56 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Rnf8Q8VC56 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.13■□□□□ 0.81
Rnf8Q8VC56 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Rnf8Q8VC56 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf8Q8VC56 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf8Q8VC56 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf8Q8VC56 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf8Q8VC56 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Rnf8Q8VC56 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Rnf8Q8VC56 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf8Q8VC56 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf8Q8VC56 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf8Q8VC56 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms