Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
Tmc1Q8R4P5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Tmc1Q8R4P5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Tmc1Q8R4P5 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Tmc1Q8R4P5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Tmc1Q8R4P5 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Tmc1Q8R4P5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
Tmc1Q8R4P5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Tmc1Q8R4P5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Tmc1Q8R4P5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC25.89■■□□□ 1.74
Tmc1Q8R4P5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Tmc1Q8R4P5 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Tmc1Q8R4P5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Tmc1Q8R4P5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC25.89■■□□□ 1.73
Tmc1Q8R4P5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Tmc1Q8R4P5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Tmc1Q8R4P5 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Tmc1Q8R4P5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Tmc1Q8R4P5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Tmc1Q8R4P5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Tmc1Q8R4P5 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
Tmc1Q8R4P5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC25.88■■□□□ 1.73
Tmc1Q8R4P5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Tmc1Q8R4P5 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Tmc1Q8R4P5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Tmc1Q8R4P5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Tmc1Q8R4P5 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Tmc1Q8R4P5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC25.87■■□□□ 1.73
Tmc1Q8R4P5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Tmc1Q8R4P5 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Tmc1Q8R4P5 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Tmc1Q8R4P5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Tmc1Q8R4P5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Tmc1Q8R4P5 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Tmc1Q8R4P5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Tmc1Q8R4P5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC25.85■■□□□ 1.73
Tmc1Q8R4P5 Gm15043-201ENSMUST00000118843 1543 ntBASIC25.85■■□□□ 1.73
Tmc1Q8R4P5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25.85■■□□□ 1.73
Tmc1Q8R4P5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Tmc1Q8R4P5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Tmc1Q8R4P5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Tmc1Q8R4P5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
Tmc1Q8R4P5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Tmc1Q8R4P5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Tmc1Q8R4P5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
Tmc1Q8R4P5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Tmc1Q8R4P5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Tmc1Q8R4P5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Tmc1Q8R4P5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Tmc1Q8R4P5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
Tmc1Q8R4P5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Tmc1Q8R4P5 Gm14523-201ENSMUST00000117260 558 ntBASIC25.83■■□□□ 1.73
Tmc1Q8R4P5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Tmc1Q8R4P5 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Tmc1Q8R4P5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
Tmc1Q8R4P5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Tmc1Q8R4P5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Tmc1Q8R4P5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC25.82■■□□□ 1.72
Tmc1Q8R4P5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Tmc1Q8R4P5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
Tmc1Q8R4P5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Tmc1Q8R4P5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Tmc1Q8R4P5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC25.81■■□□□ 1.72
Tmc1Q8R4P5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Tmc1Q8R4P5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC25.81■■□□□ 1.72
Tmc1Q8R4P5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Tmc1Q8R4P5 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Tmc1Q8R4P5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Tmc1Q8R4P5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
Tmc1Q8R4P5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Tmc1Q8R4P5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC25.8■■□□□ 1.72
Tmc1Q8R4P5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Tmc1Q8R4P5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Tmc1Q8R4P5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Tmc1Q8R4P5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Tmc1Q8R4P5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Tmc1Q8R4P5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Tmc1Q8R4P5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Tmc1Q8R4P5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC25.79■■□□□ 1.72
Tmc1Q8R4P5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Tmc1Q8R4P5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Tmc1Q8R4P5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Tmc1Q8R4P5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC25.78■■□□□ 1.72
Tmc1Q8R4P5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Tmc1Q8R4P5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Tmc1Q8R4P5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Tmc1Q8R4P5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Tmc1Q8R4P5 Gm4430-201ENSMUST00000192413 1943 ntBASIC25.77■■□□□ 1.72
Tmc1Q8R4P5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
Tmc1Q8R4P5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC25.77■■□□□ 1.72
Tmc1Q8R4P5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Tmc1Q8R4P5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Tmc1Q8R4P5 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Tmc1Q8R4P5 Gm34220-201ENSMUST00000223001 2709 ntBASIC25.76■■□□□ 1.71
Tmc1Q8R4P5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC25.76■■□□□ 1.71
Tmc1Q8R4P5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Tmc1Q8R4P5 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Tmc1Q8R4P5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Tmc1Q8R4P5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC25.76■■□□□ 1.71
Tmc1Q8R4P5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 179.3 ms