Protein–RNA interactions for Protein: Q8R1U2

Cgref1, Cell growth regulator with EF hand domain protein 1, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgref1Q8R1U2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cgref1Q8R1U2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Cgref1Q8R1U2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cgref1Q8R1U2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cgref1Q8R1U2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cgref1Q8R1U2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Cgref1Q8R1U2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cgref1Q8R1U2 Gm22567-201ENSMUST00000175542 342 ntBASIC21.36■■□□□ 1.01
Cgref1Q8R1U2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Cgref1Q8R1U2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cgref1Q8R1U2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cgref1Q8R1U2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cgref1Q8R1U2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cgref1Q8R1U2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cgref1Q8R1U2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cgref1Q8R1U2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Cgref1Q8R1U2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.34■■□□□ 1.01
Cgref1Q8R1U2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Cgref1Q8R1U2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.34■■□□□ 1.01
Cgref1Q8R1U2 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.34■■□□□ 1.01
Cgref1Q8R1U2 Gm9812-201ENSMUST00000061934 968 ntBASIC21.34■■□□□ 1.01
Cgref1Q8R1U2 Gm4799-201ENSMUST00000095396 657 ntBASIC21.34■■□□□ 1.01
Cgref1Q8R1U2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cgref1Q8R1U2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Cgref1Q8R1U2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cgref1Q8R1U2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.34■■□□□ 1.01
Cgref1Q8R1U2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cgref1Q8R1U2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cgref1Q8R1U2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cgref1Q8R1U2 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.33■■□□□ 1.01
Cgref1Q8R1U2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cgref1Q8R1U2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
Cgref1Q8R1U2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cgref1Q8R1U2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Cgref1Q8R1U2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Cgref1Q8R1U2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
Cgref1Q8R1U2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Cgref1Q8R1U2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Cgref1Q8R1U2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cgref1Q8R1U2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cgref1Q8R1U2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.31■■□□□ 1
Cgref1Q8R1U2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cgref1Q8R1U2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cgref1Q8R1U2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cgref1Q8R1U2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Cgref1Q8R1U2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.31■■□□□ 1
Cgref1Q8R1U2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Cgref1Q8R1U2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cgref1Q8R1U2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cgref1Q8R1U2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cgref1Q8R1U2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cgref1Q8R1U2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.3■■□□□ 1
Cgref1Q8R1U2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Cgref1Q8R1U2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cgref1Q8R1U2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cgref1Q8R1U2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.3■■□□□ 1
Cgref1Q8R1U2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cgref1Q8R1U2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cgref1Q8R1U2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cgref1Q8R1U2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cgref1Q8R1U2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cgref1Q8R1U2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cgref1Q8R1U2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.29■■□□□ 1
Cgref1Q8R1U2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Cgref1Q8R1U2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cgref1Q8R1U2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Cgref1Q8R1U2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cgref1Q8R1U2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cgref1Q8R1U2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cgref1Q8R1U2 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.27■■□□□ 1
Cgref1Q8R1U2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cgref1Q8R1U2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.27■■□□□ 1
Cgref1Q8R1U2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.27■■□□□ 1
Cgref1Q8R1U2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cgref1Q8R1U2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cgref1Q8R1U2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cgref1Q8R1U2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cgref1Q8R1U2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cgref1Q8R1U2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.26■□□□□ 0.99
Cgref1Q8R1U2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cgref1Q8R1U2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.26■□□□□ 0.99
Cgref1Q8R1U2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cgref1Q8R1U2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cgref1Q8R1U2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cgref1Q8R1U2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cgref1Q8R1U2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cgref1Q8R1U2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.25■□□□□ 0.99
Cgref1Q8R1U2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.25■□□□□ 0.99
Cgref1Q8R1U2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cgref1Q8R1U2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cgref1Q8R1U2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cgref1Q8R1U2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cgref1Q8R1U2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cgref1Q8R1U2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.24■□□□□ 0.99
Cgref1Q8R1U2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.24■□□□□ 0.99
Cgref1Q8R1U2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cgref1Q8R1U2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cgref1Q8R1U2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cgref1Q8R1U2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cgref1Q8R1U2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms