Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.85■□□□□ 0.77
Rfwd3Q8CIK8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rfwd3Q8CIK8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfwd3Q8CIK8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfwd3Q8CIK8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Rfwd3Q8CIK8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfwd3Q8CIK8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfwd3Q8CIK8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.84■□□□□ 0.77
Rfwd3Q8CIK8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.84■□□□□ 0.77
Rfwd3Q8CIK8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Rfwd3Q8CIK8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rfwd3Q8CIK8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfwd3Q8CIK8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rfwd3Q8CIK8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfwd3Q8CIK8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfwd3Q8CIK8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfwd3Q8CIK8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfwd3Q8CIK8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfwd3Q8CIK8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfwd3Q8CIK8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfwd3Q8CIK8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.83■□□□□ 0.77
Rfwd3Q8CIK8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfwd3Q8CIK8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.83■□□□□ 0.76
Rfwd3Q8CIK8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfwd3Q8CIK8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfwd3Q8CIK8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfwd3Q8CIK8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rfwd3Q8CIK8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rfwd3Q8CIK8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rfwd3Q8CIK8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfwd3Q8CIK8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rfwd3Q8CIK8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfwd3Q8CIK8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rfwd3Q8CIK8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rfwd3Q8CIK8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rfwd3Q8CIK8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rfwd3Q8CIK8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.81■□□□□ 0.76
Rfwd3Q8CIK8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfwd3Q8CIK8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Rfwd3Q8CIK8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Rfwd3Q8CIK8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rfwd3Q8CIK8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.81■□□□□ 0.76
Rfwd3Q8CIK8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfwd3Q8CIK8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfwd3Q8CIK8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfwd3Q8CIK8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfwd3Q8CIK8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfwd3Q8CIK8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfwd3Q8CIK8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfwd3Q8CIK8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.8■□□□□ 0.76
Rfwd3Q8CIK8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfwd3Q8CIK8 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.8■□□□□ 0.76
Rfwd3Q8CIK8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfwd3Q8CIK8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfwd3Q8CIK8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfwd3Q8CIK8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.79■□□□□ 0.76
Rfwd3Q8CIK8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfwd3Q8CIK8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfwd3Q8CIK8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Rfwd3Q8CIK8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfwd3Q8CIK8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfwd3Q8CIK8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfwd3Q8CIK8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Rfwd3Q8CIK8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.78■□□□□ 0.76
Rfwd3Q8CIK8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfwd3Q8CIK8 Gm5812-201ENSMUST00000061073 957 ntBASIC19.78■□□□□ 0.76
Rfwd3Q8CIK8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Rfwd3Q8CIK8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfwd3Q8CIK8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfwd3Q8CIK8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rfwd3Q8CIK8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Rfwd3Q8CIK8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfwd3Q8CIK8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfwd3Q8CIK8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rfwd3Q8CIK8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Rfwd3Q8CIK8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfwd3Q8CIK8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rfwd3Q8CIK8 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.76■□□□□ 0.75
Rfwd3Q8CIK8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rfwd3Q8CIK8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.76■□□□□ 0.75
Rfwd3Q8CIK8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rfwd3Q8CIK8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfwd3Q8CIK8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfwd3Q8CIK8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfwd3Q8CIK8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfwd3Q8CIK8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rfwd3Q8CIK8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.76■□□□□ 0.75
Rfwd3Q8CIK8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.76■□□□□ 0.75
Rfwd3Q8CIK8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Rfwd3Q8CIK8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfwd3Q8CIK8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfwd3Q8CIK8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rfwd3Q8CIK8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rfwd3Q8CIK8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfwd3Q8CIK8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfwd3Q8CIK8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfwd3Q8CIK8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfwd3Q8CIK8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfwd3Q8CIK8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfwd3Q8CIK8 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 1154.8 ms