Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim5Q8CI51 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim5Q8CI51 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Pdlim5Q8CI51 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim5Q8CI51 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim5Q8CI51 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim5Q8CI51 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pdlim5Q8CI51 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pdlim5Q8CI51 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.48■□□□□ 0.71
Pdlim5Q8CI51 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.48■□□□□ 0.71
Pdlim5Q8CI51 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pdlim5Q8CI51 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pdlim5Q8CI51 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.48■□□□□ 0.71
Pdlim5Q8CI51 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Pdlim5Q8CI51 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Pdlim5Q8CI51 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim5Q8CI51 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.47■□□□□ 0.71
Pdlim5Q8CI51 Gm12366-201ENSMUST00000121722 873 ntBASIC19.47■□□□□ 0.71
Pdlim5Q8CI51 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.47■□□□□ 0.71
Pdlim5Q8CI51 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.47■□□□□ 0.71
Pdlim5Q8CI51 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.47■□□□□ 0.71
Pdlim5Q8CI51 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.47■□□□□ 0.71
Pdlim5Q8CI51 Gm5786-201ENSMUST00000085368 882 ntBASIC19.47■□□□□ 0.71
Pdlim5Q8CI51 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim5Q8CI51 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim5Q8CI51 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim5Q8CI51 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim5Q8CI51 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim5Q8CI51 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.46■□□□□ 0.71
Pdlim5Q8CI51 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Pdlim5Q8CI51 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim5Q8CI51 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim5Q8CI51 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim5Q8CI51 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim5Q8CI51 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim5Q8CI51 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim5Q8CI51 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pdlim5Q8CI51 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim5Q8CI51 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim5Q8CI51 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim5Q8CI51 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim5Q8CI51 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim5Q8CI51 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim5Q8CI51 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim5Q8CI51 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.43■□□□□ 0.7
Pdlim5Q8CI51 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim5Q8CI51 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim5Q8CI51 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim5Q8CI51 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Pdlim5Q8CI51 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim5Q8CI51 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim5Q8CI51 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim5Q8CI51 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim5Q8CI51 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.42■□□□□ 0.7
Pdlim5Q8CI51 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim5Q8CI51 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
Pdlim5Q8CI51 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim5Q8CI51 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim5Q8CI51 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim5Q8CI51 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim5Q8CI51 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim5Q8CI51 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.41■□□□□ 0.7
Pdlim5Q8CI51 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim5Q8CI51 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim5Q8CI51 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.41■□□□□ 0.7
Pdlim5Q8CI51 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim5Q8CI51 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim5Q8CI51 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim5Q8CI51 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdlim5Q8CI51 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pdlim5Q8CI51 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pdlim5Q8CI51 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdlim5Q8CI51 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.4■□□□□ 0.7
Pdlim5Q8CI51 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdlim5Q8CI51 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdlim5Q8CI51 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.4■□□□□ 0.7
Pdlim5Q8CI51 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdlim5Q8CI51 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Pdlim5Q8CI51 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Pdlim5Q8CI51 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pdlim5Q8CI51 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pdlim5Q8CI51 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdlim5Q8CI51 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdlim5Q8CI51 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdlim5Q8CI51 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdlim5Q8CI51 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Pdlim5Q8CI51 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdlim5Q8CI51 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdlim5Q8CI51 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.38■□□□□ 0.69
Pdlim5Q8CI51 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pdlim5Q8CI51 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdlim5Q8CI51 Gm10420-201ENSMUST00000121713 882 ntBASIC19.38■□□□□ 0.69
Pdlim5Q8CI51 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pdlim5Q8CI51 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.38■□□□□ 0.69
Pdlim5Q8CI51 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.38■□□□□ 0.69
Pdlim5Q8CI51 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.38■□□□□ 0.69
Pdlim5Q8CI51 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pdlim5Q8CI51 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdlim5Q8CI51 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdlim5Q8CI51 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms